RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CPNE8Q86YQ8 564 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 OR7D4Q8NG98 312 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 KCTD15Q96SI1 283 aaPredicted RBP14.31□□□□□ -0.12
USP46-209ENST00000514536 PSMB7Q99436 277 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 BAG1Q99933 345 aaPredicted RBP14.31□□□□□ -0.12
USP46-209ENST00000514536 SLC6A17Q9H1V8 727 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 RETREG1Q9H6L5 497 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 PRSS16Q9NQE7 514 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 SUN2Q9UH99 717 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 PCDHA13Q9Y5I0 950 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
USP46-209ENST00000514536 TTC34A8MYJ7 566 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 EIF3CLB5ME19 914 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 EEF2KO00418 725 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 RARAP10276 462 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 NDUFV2P19404 249 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 CNR2P34972 360 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 NNMTP40261 264 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 MAPKAPK2P49137 400 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 KRT83P78385 493 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 MESDQ14696 234 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 USP39Q53GS9 565 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 PPP6R3Q5H9R7 873 aaPredicted RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 RAD9BQ6WBX8 426 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 ZNF783Q6ZMS7 281 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 PSTKQ8IV42 348 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 RHOT2Q8IXI1 618 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 KDM1BQ8NB78 822 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 GAB3Q8WWW8 586 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 RLN3Q8WXF3 142 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 HSPH1Q92598 858 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 EIF3CQ99613 913 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 CATSPERBQ9H7T0 1116 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 TFR2Q9UP52 801 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 GOLGA6L6A8MZA4 724 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 CBX4O00257 560 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 RPP40O75818 363 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 NDUFA10O95299 355 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 GOT1P17174 413 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 ACVRL1P37023 503 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 CAMK2GQ13555 558 aaPredicted RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 SIM2Q14190 667 aaPredicted RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 HADHQ16836 314 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 IL31Q6EBC2 164 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 CEP68Q76N32 757 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 ASCL5Q7RTU5 278 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 TMPRSS6Q8IU80 811 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 RTL3Q8N8U3 475 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 RFFLQ8WZ73 363 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 NKD2Q969F2 451 aaPredicted RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 MRGPRX1Q96LB2 322 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 C2orf49Q9BVC5 232 aaPredicted RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
USP46-209ENST00000514536 SEMA4AQ9H3S1 761 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 PRDM16Q9HAZ2 1276 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 ATP13A1Q9HD20 1204 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 LCMT1Q9UIC8 334 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 VPS51Q9UID3 782 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 SLC25A13Q9UJS0 675 aa14.3□□□□□ -0.12
USP46-209ENST00000514536 CFAP54Q96N23 3096 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 WASH4PA8MWX3 477 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 DCLK1O15075 740 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 DAPK3O43293 454 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 MTA2O94776 668 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 MT-CO1P00395 513 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 GLDCP23378 1020 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 HTR7P34969 479 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 NOP2P46087 812 aaKnown RBP14.29□□□□□ -0.12
USP46-209ENST00000514536 SLC25A11Q02978 314 aaKnown RBP14.29□□□□□ -0.12
USP46-209ENST00000514536 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
USP46-209ENST00000514536 LPAL2Q16609 132 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 HNRNPA1L2Q32P51 320 aaKnown RBP14.29□□□□□ -0.12
USP46-209ENST00000514536 ACCSLQ4AC99 568 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 ATP13A4Q4VNC1 1196 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 KIAA1324Q6UXG2 1013 aaKnown RBP14.29□□□□□ -0.12
USP46-209ENST00000514536 LINGO4Q6UY18 593 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 PRR23BQ6ZRT6 265 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 TMEM139Q8IV31 216 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 DCAF4L2Q8NA75 395 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 OR2T3Q8NH03 318 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 TEKT4Q8WW24 435 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 ARHGEF2Q92974 986 aaKnown RBP14.29□□□□□ -0.12
USP46-209ENST00000514536 MAGEH1Q9H213 219 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 GRPEL1Q9HAV7 217 aa14.29□□□□□ -0.12
USP46-209ENST00000514536 CWC15Q9P013 229 aaKnown RBP14.29□□□□□ -0.12
USP46-209ENST00000514536 VPS13AQ96RL7 3174 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 EDDM13A0A1B0GTR0 161 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 GOLGA6L3A6NEY3 463 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 FGF10O15520 208 aaPredicted RBP14.28□□□□□ -0.12
USP46-209ENST00000514536 RAMP2O60895 175 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 SIN3BO75182 1162 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 ZMPSTE24O75844 475 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 IPO7O95373 1038 aaKnown RBP14.28□□□□□ -0.12
USP46-209ENST00000514536 LMNAP02545 664 aaKnown RBP14.28□□□□□ -0.12
USP46-209ENST00000514536 GJC1P36383 396 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 ETFBP38117 255 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 ARHGAP25P42331 645 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 COPAP53621 1224 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 TAS2R40P59535 323 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 TCEAL1Q15170 157 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms