RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 FANCEQ9HB96 536 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 PPP1R14DQ9NXH3 145 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 GDAP2Q9NXN4 497 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD1-208ENST00000512392 DSEQ9UL01 958 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 CNTN6Q9UQ52 1028 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 UBA6A0AVT1 1052 aaPredicted RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 DENND3A2RUS2 1198 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 OR2A25A4D2G3 310 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 F2RL2O00254 374 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 O00370 1275 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 ZNF185O15231 689 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SPOPO43791 374 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 FLOT1O75955 427 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SERPINC1P01008 464 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 IL1AP01583 271 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 S100A9P06702 114 aaKnown RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 ZFXP17010 805 aaPredicted RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 GALP22466 123 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 GLRA2P23416 452 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 FPR2P25090 351 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SDHAP31040 664 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 CHRNA3P32297 505 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SLC15A1P46059 708 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 PEX5P50542 639 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 EPHB3P54753 998 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 CARD18P57730 90 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 RTP1P59025 263 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 GCNT1Q02742 428 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 CCDC173Q0VFZ6 552 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SF3A3Q12874 501 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHD1-208ENST00000512392 GPM6BQ13491 265 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 TUBB3Q13509 450 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 ALCAMQ13740 583 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 BOP1Q14137 746 aaKnown RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 GALNT3Q14435 633 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 CRYMQ14894 314 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 PFKFB3Q16875 520 aaPredicted RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 FBXO48Q5FWF7 155 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 TCTE1Q5JU00 501 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 KIAA1841Q6NSI8 718 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 LETMD1Q6P1Q0 360 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 MED25Q71SY5 747 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 PROSER1Q86XN7 944 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 CILP2Q8IUL8 1156 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SLC7A5P1Q8MH63 180 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 ZCCHC7Q8N3Z6 543 aaKnown RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 ZGPATQ8N5A5 531 aaKnown RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 ATAD1Q8NBU5 361 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 OR52E1Q8NGJ3 308 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 LILRB4Q8NHJ6 448 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 GAB3Q8WWW8 586 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 THRSPQ92748 146 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 KAT2AQ92830 837 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 TMIGD2Q96BF3 282 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 TMCO6Q96DC7 493 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 TMX3Q96JJ7 454 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 MED15Q96RN5 788 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 MIPEPQ99797 713 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 CCSER1Q9C0I3 900 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 CARD9Q9H257 536 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 WDCPQ9H6R7 721 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 SYTL2Q9HCH5 934 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 IARS2Q9NSE4 1012 aaKnown RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 SMPD3Q9NY59 655 aaPredicted RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 DKK4Q9UBT3 224 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 MAD2L2Q9UI95 211 aa6.45□□□□□ -1.38
CHD1-208ENST00000512392 BARX2Q9UMQ3 279 aaPredicted RBP6.45□□□□□ -1.38
CHD1-208ENST00000512392 SLC9B1P1A6NJY1 282 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 IGF2BP3O00425 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD1-208ENST00000512392 EBAG9O00559 213 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 FOXP2O15409 715 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 GMFGO60234 142 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 POP4O95707 220 aaKnown RBP6.44□□□□□ -1.38
CHD1-208ENST00000512392 TGFAP01135 160 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 C4BPAP04003 597 aaKnown RBP6.44□□□□□ -1.38
CHD1-208ENST00000512392 ZFYP08048 801 aaPredicted RBP6.44□□□□□ -1.38
CHD1-208ENST00000512392 ABCB1P08183 1280 aaPredicted RBP6.44□□□□□ -1.38
CHD1-208ENST00000512392 PFKLP17858 780 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 KRT4P19013 534 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 CHRM3P20309 590 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 ALDH4A1P30038 563 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 CA8P35219 290 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 KCNJ5P48544 419 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 BMXP51813 675 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 IKQ13123 557 aaPredicted RBP6.44□□□□□ -1.38
CHD1-208ENST00000512392 KCNAB1Q14722 419 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 RTP2Q5QGT7 225 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 PRAMEF9Q5VWM5 478 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 EEF1DP3Q658K8 133 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 RCSD1Q6JBY9 416 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 Q6ZVL8 140 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 ZNF365Q70YC5 407 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 KCTD9Q7L273 389 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 TAOK1Q7L7X3 1001 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 KSR1Q8IVT5 923 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 RNF141Q8WVD5 230 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 CPT1BQ92523 772 aa6.44□□□□□ -1.38
CHD1-208ENST00000512392 EXT2Q93063 718 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms