RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CHPF2Q9P2E5 772 aa7.52□□□□□ -1.21
USP53-206ENST00000510737 TSPYL4Q9UJ04 414 aa7.52□□□□□ -1.21
USP53-206ENST00000510737 B4DGG1 531 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 GTPBP1O00178 669 aaKnown RBP7.51□□□□□ -1.21
USP53-206ENST00000510737 PRAMEF2O60811 474 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 PCCAP05165 728 aaPredicted RBP7.51□□□□□ -1.21
USP53-206ENST00000510737 IL1R1P14778 569 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 KLRC1P26715 233 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 FKBP1AP62942 108 aaKnown RBP7.51□□□□□ -1.21
USP53-206ENST00000510737 KRT24Q2M2I5 525 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 LYZL4Q96KX0 146 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 PARK7Q99497 189 aaKnown RBP7.51□□□□□ -1.21
USP53-206ENST00000510737 FAM234AQ9H0X4 552 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 THEGQ9P2T0 379 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 GJD2Q9UKL4 321 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 NUDCQ9Y266 331 aa7.51□□□□□ -1.21
USP53-206ENST00000510737 FAM90A8PA6NJQ4 464 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 RRHO14718 337 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 RASSF9O75901 435 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 PIAS2O75928 621 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 FAM90A13PP0C7W8 464 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 FAM90A24PP0C7X0 464 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 CACNB3P54284 484 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 ARHGEF7Q14155 803 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 TMEM31Q5JXX7 168 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 MAP3K21Q5TCX8 1036 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 KIAA0319LQ8IZA0 1049 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 RBMXL3Q8N7X1 1067 aaKnown RBP7.5□□□□□ -1.21
USP53-206ENST00000510737 RUNDC1Q96C34 613 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 NMD3Q96D46 503 aaKnown RBP7.5□□□□□ -1.21
USP53-206ENST00000510737 TRMOQ9BU70 441 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 TM2D2Q9BX73 214 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 STK31Q9BXU1 1019 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 CDH19Q9H159 772 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 FZD4Q9ULV1 537 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 NOP58Q9Y2X3 529 aaKnown RBP7.5□□□□□ -1.21
USP53-206ENST00000510737 REV3LO60673 3130 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 MUC6Q6W4X9 2439 aa7.5□□□□□ -1.21
USP53-206ENST00000510737 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.49□□□□□ -1.21
USP53-206ENST00000510737 CAPN8A6NHC0 703 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 STK3Q13188 491 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 TMEM63BQ5T3F8 832 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 PIM3Q86V86 326 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 PNPLA1Q8N8W4 532 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 BADQ92934 168 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 SUCLG2Q96I99 432 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 CFAP53Q96M91 514 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 PLEKHF1Q96S99 279 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 TMEM60Q9H2L4 133 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 SEMA5BQ9P283 1151 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 ZNF112Q9UJU3 913 aa7.49□□□□□ -1.21
USP53-206ENST00000510737 ECM29Q5VYK3 1845 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 C16orf96A6NNT2 1141 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 A8MVJ9 347 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 CXCL11O14625 94 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 MBPP02686 304 aaPredicted RBP7.48□□□□□ -1.21
USP53-206ENST00000510737 KPNB1Q14974 876 aaKnown RBP7.48□□□□□ -1.21
USP53-206ENST00000510737 CNN3Q15417 329 aaKnown RBP7.48□□□□□ -1.21
USP53-206ENST00000510737 ZNF549Q6P9A3 640 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 C15orf52Q6ZUT6 534 aaKnown RBP7.48□□□□□ -1.21
USP53-206ENST00000510737 MMP21Q8N119 569 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 ANKRD13CQ8N6S4 541 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 CCDC191Q8NCU4 936 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 TRIB2Q92519 343 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 PRR11Q96HE9 360 aaPredicted RBP7.48□□□□□ -1.21
USP53-206ENST00000510737 HIC2Q96JB3 615 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 MYD88Q99836 296 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 ANKRD2Q9GZV1 360 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 DHX36Q9H2U1 1008 aaKnown RBP7.48□□□□□ -1.21
USP53-206ENST00000510737 USP29Q9HBJ7 922 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 COL20A1Q9P218 1284 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 DKK4Q9UBT3 224 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 VPS51Q9UID3 782 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 L1RE1Q9UN81 338 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 LTBP2Q14767 1821 aa7.48□□□□□ -1.21
USP53-206ENST00000510737 WDFY4Q6ZS81 3184 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 MAST2Q6P0Q8 1798 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 E2F8A0AVK6 867 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 A6NNZ2 444 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 RAB27BO00194 218 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 CTNND1O60716 968 aaKnown RBP7.47□□□□□ -1.21
USP53-206ENST00000510737 TULP3O75386 442 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 TAF5LO75529 589 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 RFPL1O75677 317 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 RPS16P62249 146 aaKnown RBP7.47□□□□□ -1.21
USP53-206ENST00000510737 HSF1Q00613 529 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 CHRNDQ07001 517 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 STIM1Q13586 685 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 SEMA3AQ14563 771 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 UBAP2Q5T6F2 1119 aaKnown RBP7.47□□□□□ -1.21
USP53-206ENST00000510737 TFAP2DQ7Z6R9 452 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 SCNM1Q9BWG6 230 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 HIPK2Q9H2X6 1198 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 AGO4Q9HCK5 861 aaKnown RBP7.47□□□□□ -1.21
USP53-206ENST00000510737 DBF4Q9UBU7 674 aaPredicted RBP7.47□□□□□ -1.21
USP53-206ENST00000510737 NKX1-2Q9UD57 310 aaPredicted RBP7.47□□□□□ -1.21
USP53-206ENST00000510737 MID2Q9UJV3 735 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 PAXBP1Q9Y5B6 917 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 NCOR1O75376 2440 aa7.47□□□□□ -1.21
USP53-206ENST00000510737 C2CD4BA6NLJ0 364 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms