RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 NDST2P52849 883 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 DCDC1P59894 354 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 TEFQ10587 303 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 BNIP3Q12983 259 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 CALCOCO2Q13137 446 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC39A6Q13433 755 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 ELOAQ14241 798 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 KCNAB1Q14722 419 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 GRAMD1BQ3KR37 738 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 RSBN1Q5VWQ0 802 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 ZFP1Q6P2D0 407 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 GALNT18Q6P9A2 607 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 KIAA0408Q6ZU52 694 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 GPRIN3Q6ZVF9 776 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 OTOAQ7RTW8 1153 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 KRT26Q7Z3Y9 468 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 GALNT12Q8IXK2 581 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 POU5F2Q8N7G0 328 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 ANKRD42Q8N9B4 389 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 SNX31Q8N9S9 440 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 LEMD2Q8NC56 503 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 OR52N1Q8NH53 320 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 UTP15Q8TED0 518 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 UFD1Q92890 307 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 DCUN1D5Q9BTE7 237 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 KCNK9Q9NPC2 374 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 TOR4AQ9NXH8 423 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 GLTPQ9NZD2 209 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 IPO11Q9UI26 975 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 FBXO2Q9UK22 296 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 DBR1Q9UK59 544 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 RPH3AQ9Y2J0 694 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 RAD54BQ9Y620 910 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 RAPGEF6Q8TEU7 1601 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 FAM208AQ9UK61 1670 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 A0A0X1KG70 313 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 B2RBV5 119 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 TARM1B6A8C7 271 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 POLR2DO15514 142 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 BCL10O95999 233 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CHRNA1P02708 482 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CCNA2P20248 432 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 ITGA6P23229 1130 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CCR10P46092 362 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CSNK2BP67870 215 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 VAC14Q08AM6 782 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CCNIQ14094 377 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 NCF4Q15080 339 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 ASIC2Q16515 512 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 TMEM95Q3KNT9 176 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 METTL24Q5JXM2 366 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 AGAP6Q5VW22 663 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 ZNF544Q6NX49 715 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 PAOXQ6QHF9 649 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 LYPD8Q6UX82 237 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 UTS2BQ765I0 119 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CYFIP1Q7L576 1253 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 PRSS42Q7Z5A4 293 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 HORMAD1Q86X24 394 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 SPNS2Q8IVW8 549 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 EID3Q8N140 333 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CADM2Q8N3J6 435 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CAMKK1Q8N5S9 505 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 ANKRD13CQ8N6S4 541 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 DNAAF3Q8N9W5 541 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 OR6P1Q8NGX9 317 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 TPCN2Q8NHX9 752 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 TESCQ96BS2 214 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 AGAP4Q96P64 663 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 BCL7BQ9BQE9 202 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 OSBPL11Q9BXB4 747 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 NOL6Q9H6R4 1146 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CXorf21Q9HAI6 301 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 LY9Q9HBG7 655 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 RPRD1BQ9NQG5 326 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 FBXO8Q9NRD0 319 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 TBC1D22BQ9NU19 505 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 SMOXQ9NWM0 555 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 GRHL1Q9NZI5 618 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 CTNND2Q9UQB3 1225 aa11.01□□□□□ -0.65
PDLIM5-210ENST00000508216 A0A1W2PRG6 482 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PQLC2LA1A4F0 135 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PRMT3O60678 531 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 CIAO1O76071 339 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ENO3P13929 434 aaPredicted RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 HOXB8P17481 243 aaPredicted RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 EIF4A3P38919 411 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 ZAP70P43403 619 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 RPL10AP62906 217 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 ZNF200P98182 395 aaPredicted RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 BNIP2Q12982 314 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 DUSP4Q13115 394 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms