RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 YBEYP58557 167 aaPredicted RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 SUMO1P63165 101 aaKnown RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 MAPK6Q16659 721 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 RFX8Q6ZV50 586 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 CENPUQ71F23 418 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 GALNT7Q86SF2 657 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 DPP9Q86TI2 863 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 LIX1LQ8IVB5 337 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 UNC45BQ8IWX7 931 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 CCHCR1Q8TD31 782 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 KCNN1Q92952 543 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 NKD2Q969F2 451 aaPredicted RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 SMC6Q96SB8 1091 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 GSX2Q9BZM3 304 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 SDCBP2Q9H190 292 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 MINDY3Q9H8M7 445 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 PCDH9Q9HC56 1237 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 FAM86C1Q9NVL1 165 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 HPF1Q9NWY4 346 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 VPS28Q9UK41 221 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 PCDHGB4Q9UN71 923 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 BRCA1P38398 1863 aaKnown RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 PAPPA2Q9BXP8 1791 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 KHNYNO15037 678 aaKnown RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 TMEM63AO94886 807 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 SNX4O95219 450 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 ERBB2P04626 1255 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 RPLP1P05386 114 aaKnown RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 ATP5F1P24539 256 aaPredicted RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 CDH5P33151 784 aaPredicted RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 RPL22P35268 128 aaKnown RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 NRG1Q02297 640 aaPredicted RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 ACAP2Q15057 778 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 NPNTQ6UXI9 565 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 LBX2Q6XYB7 198 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 ASRGL1Q7L266 308 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 RIBC1Q8N443 379 aaPredicted RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 CAMKK1Q8N5S9 505 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 NIPA2Q8N8Q9 360 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 GBP7Q8N8V2 638 aaPredicted RBP9.17□□□□□ -0.94
FN1-227ENST00000498719 FAM71DQ8N9W8 422 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 SEPT1Q8WYJ6 367 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 HSPH1Q92598 858 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 TTC25Q96NG3 672 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 TM9SF2Q99805 663 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 LRFN3Q9BTN0 628 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 FOXP3Q9BZS1 431 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 MIR1-1HGQ9H1L0 117 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 SMYD3Q9H7B4 428 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 ARHGEF3Q9NR81 526 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 KCNH4Q9UQ05 1017 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 CHKBQ9Y259 395 aa9.17□□□□□ -0.94
FN1-227ENST00000498719 KLHL33A6NCF5 533 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 CAPN9O14815 690 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 PRPF4O43172 522 aaKnown RBP eCLIP9.16□□□□□ -0.94
FN1-227ENST00000498719 TYROBPO43914 113 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 NFICP08651 508 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 EZRP15311 586 aaKnown RBP9.16□□□□□ -0.94
FN1-227ENST00000498719 KDELR1P24390 212 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 ADRA1DP25100 572 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 CTSSP25774 331 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 TARSP26639 723 aaKnown RBP9.16□□□□□ -0.94
FN1-227ENST00000498719 SLC8A1P32418 973 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 MSH2P43246 934 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 CLCN3P51790 818 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 EFNA5P52803 228 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 ARL4CP56559 192 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 MMRN1Q13201 1228 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 NEDD9Q14511 834 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 AGERQ15109 404 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 RNF43Q68DV7 783 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 TDRPQ86YL5 185 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 KIRREL3Q8IZU9 778 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 NUP93Q8N1F7 819 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 KRT78Q8N1N4 520 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 MAGEC3Q8TD91 643 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 PYROXD1Q8WU10 500 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 COPS5Q92905 334 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 UTP4Q969X6 686 aaKnown RBP9.16□□□□□ -0.94
FN1-227ENST00000498719 NECAB3Q96P71 396 aaPredicted RBP9.16□□□□□ -0.94
FN1-227ENST00000498719 ZNF518BQ9C0D4 1074 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 ASCC2Q9H1I8 757 aaPredicted RBP9.16□□□□□ -0.94
FN1-227ENST00000498719 SYNCQ9H7C4 482 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 SIX4Q9UIU6 781 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 DUSP12Q9UNI6 340 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 SHOC2Q9UQ13 582 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 TRIM17Q9Y577 477 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 CEP83Q9Y592 693 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 TLL2Q9Y6L7 1015 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 NUMBLQ9Y6R0 609 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
FN1-227ENST00000498719 SIGLEC16A6NMB1 481 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 FAM227AF5H4B4 570 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 UNC5CO95185 931 aa9.16□□□□□ -0.94
FN1-227ENST00000498719 HDCP19113 662 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms