RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 RBM38Q9H0Z9 239 aaKnown RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 PABPC3Q9H361 631 aaKnown RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 CD93Q9NPY3 652 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 PRDM8Q9NQV8 689 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 SRP68Q9UHB9 627 aaKnown RBP2.72□□□□□ -1.97
RBM39-242ENST00000498280 DAPP1Q9UN19 280 aa2.72□□□□□ -1.97
RBM39-242ENST00000498280 SPTLC2O15270 562 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 TFEBP19484 476 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 TBXAS1P24557 533 aaPredicted RBP2.71□□□□□ -1.98
RBM39-242ENST00000498280 STAT6P42226 847 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 ENTPD1P49961 510 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 DGKQP52824 942 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 FAM3BP58499 235 aaPredicted RBP2.71□□□□□ -1.98
RBM39-242ENST00000498280 DSCR9P59020 149 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 BIRC3Q13489 604 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 CUL4BQ13620 913 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 C6orf10Q5SRN2 563 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 ATPAF1Q5TC12 328 aaPredicted RBP2.71□□□□□ -1.98
RBM39-242ENST00000498280 HMBOX1Q6NT76 420 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 C16orf89Q6UX73 402 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 KRT27Q7Z3Y8 459 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 TRABD2AQ86V40 505 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 MOGAT3Q86VF5 341 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 ZNF354CQ86Y25 554 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 CPXCR1Q8N123 301 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 CSGALNACT1Q8TDX6 532 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 WDR60Q8WVS4 1066 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 NPIPB3Q92617 1050 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 URB1-AS1Q96HZ7 61 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.71□□□□□ -1.98
RBM39-242ENST00000498280 BRD8Q9H0E9 1235 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 TAF1DQ9H5J8 278 aaPredicted RBP2.71□□□□□ -1.98
RBM39-242ENST00000498280 ELAC1Q9H777 363 aaKnown RBP2.71□□□□□ -1.98
RBM39-242ENST00000498280 SEPSECSQ9HD40 501 aaKnown RBP2.71□□□□□ -1.98
RBM39-242ENST00000498280 FZD3Q9NPG1 666 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 PLSCR4Q9NRQ2 329 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 SAGE1Q9NXZ1 904 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.71□□□□□ -1.98
RBM39-242ENST00000498280 CNTN6Q9UQ52 1028 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 SCN5AQ14524 2016 aa2.71□□□□□ -1.98
RBM39-242ENST00000498280 LOC105369274A0A096LPK9 316 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 LOC102723532A0A0G2JNH3 316 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 A0A1B0GVT2 93 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 GXYLT2A0PJZ3 443 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 CCDC189A1A4V9 331 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 BECN2A8MW95 431 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 B9A039 149 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 H0Y3Z8 333 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 USP12O75317 370 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 KRT38O76015 456 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 DDNO94850 711 aaPredicted RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 CYP21A2P08686 494 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 CST5P28325 142 aaPredicted RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 IGHMBP2P38935 993 aaKnown RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 MLH1P40692 756 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 POLE2P56282 527 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 ARL4CP56559 192 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 GAD2Q05329 585 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 DMWDQ09019 674 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 SF3A3Q12874 501 aaKnown RBP eCLIP2.7□□□□□ -1.98
RBM39-242ENST00000498280 TRAF1Q13077 416 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 AAK1Q2M2I8 961 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 KRT71Q3SY84 523 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 TRIM60Q495X7 471 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 WASHC2DQ5SRD0 308 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 TTC22Q5TAA0 569 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 ANKRD40Q6AI12 368 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 NADSYN1Q6IA69 706 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 NFRKBQ6P4R8 1299 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 PRSS57Q6UWY2 283 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 DHRS13Q6UX07 377 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 RAB11FIP2Q7L804 512 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 FTSJ3Q8IY81 847 aaKnown RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 OR4N4Q8N0Y3 316 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 PRR26Q8N8Z3 221 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 HMGB4Q8WW32 186 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 PPM1EQ8WY54 764 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 OVCA2Q8WZ82 227 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 RSC1A1Q92681 617 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 KAT2AQ92830 837 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 TRIM63Q969Q1 353 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 C3orf49Q96BT1 292 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 REXO5Q96IC2 774 aaKnown RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 TRAPPC9Q96Q05 1148 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 SENP7Q9BQF6 1050 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 PAAF1Q9BRP4 392 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 DDX23Q9BUQ8 820 aaKnown RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 CCDC134Q9H6E4 229 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 RMI1Q9H9A7 625 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 SIRT3Q9NTG7 399 aaPredicted RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 FBXO28Q9NVF7 368 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 PLEKHB1Q9UF11 243 aaPredicted RBP2.7□□□□□ -1.98
RBM39-242ENST00000498280 KCND3Q9UK17 655 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 RAB21Q9UL25 225 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 LZTS1Q9Y250 596 aa2.7□□□□□ -1.98
RBM39-242ENST00000498280 CKAP5Q14008 2032 aa2.69□□□□□ -1.98
RBM39-242ENST00000498280 RPS10-NUDT3A0A1W2PQS6 291 aa2.69□□□□□ -1.98
RBM39-242ENST00000498280 CLEC18AA5D8T8 446 aa2.69□□□□□ -1.98
RBM39-242ENST00000498280 SLC38A8A6NNN8 435 aa2.69□□□□□ -1.98
RBM39-242ENST00000498280 INAFM1C9JVW0 142 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms