RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 DDX23Q9BUQ8 820 aaKnown RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 SARGQ9BW04 601 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 LTB4R2Q9NPC1 389 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 ANKEF1Q9NU02 776 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 NCDNQ9UBB6 729 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 FBXW11Q9UKB1 542 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 CDC42EP3Q9UKI2 254 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 TPCN1Q9ULQ1 816 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 DNM3Q9UQ16 869 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 CDY1Q9Y6F8 540 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 SF3B1O75533 1304 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 RALGAPA1Q6GYQ0 2036 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 ATG2BQ96BY7 2078 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 VWA8A3KMH1 1905 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 SHISA7A6NL88 538 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 BTBD18B2RXH4 712 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 AP1G1O43747 822 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 PFKFB2O60825 505 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 RECQL4O94761 1208 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 B3GAT3O94766 335 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 SEC24DO94855 1032 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 FSBPO95073 299 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 LYPLA2O95372 231 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 EDN1P05305 212 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 XRCC6P12956 609 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 FDPSP14324 419 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 PTPN2P17706 415 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 XBP1P17861 261 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 TKTP29401 623 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 BRCC3P46736 316 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 MEOX1P50221 254 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 CLCNKBP51801 687 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 OSTNP61366 133 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 CREMQ03060 361 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 MTAPQ13126 283 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 PRPF4BQ13523 1007 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 USP10Q14694 798 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 NAB2Q15742 525 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 SLC5A9Q2M3M2 681 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF528Q3MIS6 628 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 TRIM68Q6AZZ1 485 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 KLHDC10Q6PID8 442 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 CD300LGQ6UXG3 332 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF852Q6ZMS4 543 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 TPRG1Q6ZUI0 275 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 MTSS1LQ765P7 747 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF761Q86XN6 746 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 CATSPER3Q86XQ3 398 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 ADGRG2Q8IZP9 1017 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 NECAB1Q8N987 351 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 TP53I13Q8NBR0 393 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 PPP1R14CQ8TAE6 165 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 GFM2Q969S9 779 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 CLDN23Q96B33 292 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 TCEAL4Q96EI5 215 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 LCORQ96JN0 433 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 NELL2Q99435 816 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 NAP1L4Q99733 375 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 NFKBIZQ9BYH8 718 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 FZD8Q9H461 694 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 PDZD7Q9H5P4 517 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 PRMT7Q9NVM4 692 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 ZSCAN32Q9NX65 697 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 ORC3Q9UBD5 711 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 ADAM29Q9UKF5 820 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 FBXO4Q9UKT5 387 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 NDRG2Q9UN36 371 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 CHD8Q9HCK8 2581 aa5.62□□□□□ -1.51
PTCD3-219ENST00000494323 MAP1BP46821 2468 aaKnown RBP5.62□□□□□ -1.51
PTCD3-219ENST00000494323 A0A0A6YYK5 440 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 SMIM28A0A1B0GU29 152 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ACKR2O00590 384 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 NCAM2O15394 837 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 FOXD2O60548 495 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MED24O75448 989 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ECI2O75521 394 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 CDKL5O76039 1030 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 SEC24AO95486 1093 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 RHOP08100 348 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 GJA1P17302 382 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 CEBPBP17676 345 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 TGM1P22735 817 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 HOXA9P31269 272 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MCM7P33993 719 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 KRT2P35908 639 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 BUD31P41223 144 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 VIPR2P41587 438 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 SLURP1P55000 103 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ELAVL2Q12926 359 aaKnown RBP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ADRM1Q16186 407 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MAPK6Q16659 721 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ARHGAP29Q52LW3 1261 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 FAM78AQ5JUQ0 283 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 NT5DC1Q5TFE4 455 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ERICH6BQ5W0A0 696 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ARID2Q68CP9 1835 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 GAREM2Q75VX8 874 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 CHST15Q7LFX5 561 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 FAM124AQ86V42 546 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms