RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 UBE2E3Q969T4 207 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 MCCC1Q96RQ3 725 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 APOL2Q9BQE5 337 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF518BQ9C0D4 1074 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SUCOQ9UBS9 1254 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CNOT7Q9UIV1 285 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 PSME2Q9UL46 239 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SHOC2Q9UQ13 582 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 R3HDM2Q9Y2K5 976 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CDHR2Q9BYE9 1310 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 RGSL1A5PLK6 1076 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 METTL21EPA6NDL7 271 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 OGTO15294 1046 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SERPINA3P01011 423 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 JCHAINP01591 159 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CDH3P22223 829 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 RXRBP28702 533 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SCNN1BP51168 640 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 MTTPP55157 894 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ACOX1Q15067 660 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 TAF1CQ15572 869 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SMU1Q2TAY7 513 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 TNFAIP8L3Q5GJ75 292 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 BHLHB9Q6PI77 547 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 IL27RAQ6UWB1 636 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ITIH5Q86UX2 942 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 KCNMB4Q86W47 210 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ADGRG2Q8IZP9 1017 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 NOA1Q8NC60 698 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 NEDD1Q8NHV4 660 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 RP9Q8TA86 221 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ATXN2LQ8WWM7 1075 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 TRNT1Q96Q11 434 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CCDC28BQ9BUN5 200 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ELP3Q9H9T3 547 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 OPTCQ9UBM4 332 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CKLFQ9UBR5 152 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 NCKAP1Q9Y2A7 1128 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 GPR182O15218 404 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ZBTB14O43829 449 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 GP5P40197 560 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CDK7P50613 346 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CASP5P51878 434 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 PLD1Q13393 1074 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 BAATQ14032 418 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 FAM131AQ6UXB0 335 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SYNE4Q8N205 404 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 LPAR1Q92633 364 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 HGH1Q9BTY7 390 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 C1QTNF7Q9BXJ2 289 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 RHBGQ9H310 441 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 GGA3Q9NZ52 723 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 MYMKA6NI61 221 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 C19orf81C9J6K1 198 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 URODP06132 367 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 GSTT1P30711 240 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 PPP2R2BQ00005 443 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 PPIL2Q13356 520 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 TYSND1Q2T9J0 566 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 GPAT3Q53EU6 434 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ADGRF2Q8IZF7 708 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SYTL5Q8TDW5 730 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 FAR1Q8WVX9 515 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ALDH8A1Q9H2A2 487 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CCNB1IP1Q9NPC3 277 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 THG1LQ9NWX6 298 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 MLXQ9UH92 298 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 DPP7Q9UHL4 492 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF214Q9UL59 606 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 HEG1Q9ULI3 1381 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ATXN2Q99700 1313 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 GAS2O43903 313 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SNAP91O60641 907 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SERPINF2P08697 491 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 FGFR3P22607 806 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 PDX1P52945 283 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF615Q8N8J6 731 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 TC2NQ8N9U0 490 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ZC3H10Q96K80 434 aaKnown RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 KCNF1Q9H3M0 494 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 PNPLA8Q9NP80 782 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SAR1AQ9NR31 198 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ANKEF1Q9NU02 776 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 GPATCH2LQ9NWQ4 482 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 C3orf18Q9UK00 162 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 USP18Q9UMW8 372 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 NOS1APO75052 506 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-221ENST00000493795 MED24O75448 989 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 PSMG1O95456 288 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 IFNGP01579 166 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 MMP10P09238 476 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CCNYL3P0C7X3 344 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 ATP4AP20648 1035 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CXCR2P25025 360 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CDK16Q00536 496 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 SNAPC2Q13487 334 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 CCNG2Q16589 344 aa7.98□□□□□ -1.13
BRCA1-221ENST00000493795 AMHR2Q16671 573 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms