RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LRRC72A6NJI9 287 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 TAF4O00268 1085 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 MCF2LO15068 1137 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 ALOX15BO15296 676 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 RNASEH1O60930 286 aaKnown RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 GRAP2O75791 330 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 ADCY5O95622 1261 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 LSM8O95777 96 aaKnown RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 ADH1BP00325 375 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 F9P00740 461 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 WNT1P04628 370 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 PNMA6AP0CW24 399 aaPredicted RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 UCHL3P15374 230 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 VAV1P15498 845 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 PDGFRAP16234 1089 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 TFE3P19532 575 aaPredicted RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 USP8P40818 1118 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 MTIF2P46199 727 aaKnown RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 STK19P49842 368 aaPredicted RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 ADPRHP54922 357 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 CDH4P55283 916 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 COL9A2Q14055 689 aaPredicted RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 SHBQ15464 509 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 SLC25A52Q3SY17 297 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 RABGAP1LQ5R372 815 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 CDKAL1Q5VV42 579 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 OR6B2Q6IFH4 312 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 TRNP1Q6NT89 227 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 RBM43Q6ZSC3 357 aaKnown RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 TMPRSS7Q7RTY8 843 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 C14orf80Q86SX3 495 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 SETD3Q86TU7 594 aaPredicted RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 XYLT1Q86Y38 959 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 PASD1Q8IV76 773 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 STK40Q8N2I9 435 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 TMEM35BQ8NCS4 154 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 RPL10LQ96L21 214 aaKnown RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 SPAG5Q96R06 1193 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 PSMB7Q99436 277 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 CDC6Q99741 560 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 STK33Q9BYT3 514 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 FAM204AQ9H8W3 233 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 ERVMER34-1Q9H9K5 563 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 SAMSN1Q9NSI8 373 aaKnown RBP8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 PIGVQ9NUD9 493 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 ARHGAP20Q9P2F6 1191 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 TMEM59LQ9UK28 342 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 FHOD1Q9Y613 1164 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 FREM2Q5SZK8 3169 aa8.62□□□□□ -1.03
SMARCB1-207ENST00000491967 TRPM6Q9BX84 2022 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 A0A1B0GTQ1 180 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 A0A1W2PP55 124 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 SRRM3A6NNA2 597 aaPredicted RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 H0Y8X5 98 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 M0QYT0 321 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 WNT9AO14904 365 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 TNFSF14O43557 240 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 PLRG1O43660 514 aaKnown RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 RNASEH2AO75792 299 aaKnown RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 FSBPO95073 299 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 NUDT1P36639 197 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 NNMTP40261 264 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 RXRGP48443 463 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 CENPCQ03188 943 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 ZNF177Q13360 481 aaPredicted RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 SUZ12Q15022 739 aaKnown RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 ALFQ53S48 1182 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 TCP11X2Q5H9J9 407 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 KANSL1Q7Z3B3 1105 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 TRIM69Q86WT6 500 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 CIR1Q86X95 450 aaPredicted RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 CREBRFQ8IUR6 639 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 SH2D3CQ8N5H7 860 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 ENOX1Q8TC92 643 aaKnown RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 EPS8L1Q8TE68 723 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 SAP25Q8TEE9 199 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 C18orf8Q96DM3 657 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 RPRD1AQ96P16 312 aaPredicted RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 HAPLN3Q96S86 360 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 WDCPQ9H6R7 721 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 LMBRD1Q9NUN5 540 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 DKK4Q9UBT3 224 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 NOCTQ9UK39 431 aaKnown RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 SARDHQ9UL12 918 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 VANGL2Q9ULK5 521 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 APOBEC2Q9Y235 224 aaKnown RBP8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 BTBD3Q9Y2F9 522 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 PCDHB9Q9Y5E1 797 aa8.61□□□□□ -1.03
SMARCB1-207ENST00000491967 LRRC10BA6NIK2 292 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 F8VZ95 297 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 KCNK3O14649 394 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ZNF821O75541 412 aaPredicted RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ZMPSTE24O75844 475 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 CNTN5O94779 1100 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 MT-CO1P00395 513 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms