RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SLC6A18Q96N87 628 aa19.98■□□□□ 0.79
TNFRSF1B-202ENST00000489921 OMDQ99983 421 aa19.98■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SARDHQ9UL12 918 aa19.98■□□□□ 0.79
TNFRSF1B-202ENST00000489921 TBC1D30Q9Y2I9 924 aa19.98■□□□□ 0.79
TNFRSF1B-202ENST00000489921 VILLO15195 856 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 FLRT2O43155 660 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ATP9BO43861 1147 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 CNTN5O94779 1100 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 C5AR1P21730 350 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RDXP35241 583 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ADPRHP54922 357 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 BPIFB4P59827 614 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RACK1P63244 317 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ELAVL3Q14576 367 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RNF219Q5W0B1 726 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 TRNP1Q6NT89 227 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SND1Q7KZF4 910 aaKnown RBP eCLIP19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 BNIPLQ7Z465 357 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 XYLT1Q86Y38 959 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ZDHHC17Q8IUH5 632 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RHBDD1Q8TEB9 315 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 PGAP3Q96FM1 320 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 TMPRSS4Q9NRS4 437 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SNX10Q9Y5X0 201 aa19.97■□□□□ 0.79
TNFRSF1B-202ENST00000489921 A0A1W2PR77 199 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 FAM170AA1A519 330 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 LRRC72A6NJI9 287 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SRRM3A6NNA2 597 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 TAF4O00268 1085 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 PLK4O00444 970 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 PCDHGA12O60330 932 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ADH1BP00325 375 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 IL1BP01584 269 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ATXN1LP0C7T5 689 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 UCHL3P15374 230 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 CCR5P51681 352 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 OXCT1P55809 520 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SNX16P57768 344 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RNASE9P60153 205 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SFSWAPQ12872 951 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RAPGEF1Q13905 1077 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ALFQ53S48 1182 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 C2CD6Q53TS8 623 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 TCP11X2Q5H9J9 407 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 CLEC17AQ6ZS10 378 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 NOP9Q86U38 636 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 TMEM35BQ8NCS4 154 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SPAG5Q96R06 1193 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 PSMB7Q99436 277 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 TKTL2Q9H0I9 626 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 SIK2Q9H0K1 926 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 NUP62CLQ9H1M0 184 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RRN3Q9NYV6 651 aa19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 RALYQ9UKM9 306 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1B-202ENST00000489921 ZFYVE26Q68DK2 2539 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 DRGXA6NNA5 263 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 LATO43561 262 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 CLDN11O75508 207 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 SCNN1AP37088 669 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 NNMTP40261 264 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 CDH4P55283 916 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 PPP2CBP62714 309 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 PPP2CAP67775 309 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 MTA1Q13330 715 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 ZNF177Q13360 481 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 SHBQ15464 509 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 DLG2Q15700 870 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 BRMS1LQ5PSV4 323 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 PRAMEF14Q5SWL7 426 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 CCNI2Q6ZMN8 369 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 SH2D3CQ8N5H7 860 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 OR14C36Q8NHC7 312 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 C18orf8Q96DM3 657 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 TBCBQ99426 244 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 WDCPQ9H6R7 721 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 SYNCQ9H7C4 482 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 LMBRD1Q9NUN5 540 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 ARHGAP20Q9P2F6 1191 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 TMEM59LQ9UK28 342 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 PPM1HQ9ULR3 514 aa19.95■□□□□ 0.78
TNFRSF1B-202ENST00000489921 MT-CO1P00395 513 aa19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 FLT3P36888 993 aa19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 SUZ12Q15022 739 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 SLC25A52Q3SY17 297 aa19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 TAF3Q5VWG9 929 aa19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 ZCCHC14Q8WYQ9 949 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 C1orf74Q96LT6 269 aa19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 STK33Q9BYT3 514 aa19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 GANQ9H2C0 597 aa19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 APOBEC2Q9Y235 224 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-202ENST00000489921 COL5A1P20908 1838 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF1B-202ENST00000489921 IGLV3-10A0A075B6K4 115 aa19.93■□□□□ 0.78
TNFRSF1B-202ENST00000489921 A0A1B0GTQ1 180 aa19.93■□□□□ 0.78
TNFRSF1B-202ENST00000489921 F8VZ95 297 aa19.93■□□□□ 0.78
TNFRSF1B-202ENST00000489921 RNF103O00237 685 aa19.93■□□□□ 0.78
TNFRSF1B-202ENST00000489921 MCF2LO15068 1137 aa19.93■□□□□ 0.78
TNFRSF1B-202ENST00000489921 RTN2O75298 545 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms