RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF484Q5JVG2 852 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 MANEAQ5SRI9 462 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 KDELC2Q7Z4H8 507 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 PAGR1Q9BTK6 254 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 TRIM31Q9BZY9 425 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 MAP6D1Q9H9H5 199 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 TLR8Q9NR97 1041 aaKnown RBP5.72□□□□□ -1.49
CCDC39-206ENST00000489868 KLQ9UEF7 1012 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 FEM1BQ9UK73 627 aa5.72□□□□□ -1.49
CCDC39-206ENST00000489868 MORC2Q9Y6X9 1032 aaPredicted RBP5.72□□□□□ -1.49
CCDC39-206ENST00000489868 TRBV5-7A0A0A0MS05 114 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 IFRD1O00458 451 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-206ENST00000489868 TULP3O75386 442 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 TFRCP02786 760 aaKnown RBP5.71□□□□□ -1.5
CCDC39-206ENST00000489868 GAD2Q05329 585 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 PMPCAQ10713 525 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 GPR162Q16538 588 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 GXYLT1Q4G148 440 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 TTC39AQ5SRH9 613 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 LINS1Q8NG48 757 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 ZNF419Q96HQ0 510 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-206ENST00000489868 NLRP4Q96MN2 994 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 FAM167BQ9BTA0 163 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 ACAD9Q9H845 621 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 CHODLQ9H9P2 273 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 KIF17Q9P2E2 1029 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 SLC25A13Q9UJS0 675 aa5.71□□□□□ -1.5
CCDC39-206ENST00000489868 H3BNX3 289 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 TK1P04183 234 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 DHRS4L1P0CG22 281 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 HOXB2P14652 356 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 ARSAP15289 507 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 HALP42357 657 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 ALDH7A1P49419 539 aaKnown RBP5.7□□□□□ -1.5
CCDC39-206ENST00000489868 RBM5P52756 815 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC39-206ENST00000489868 ALKBH1Q13686 389 aaKnown RBP5.7□□□□□ -1.5
CCDC39-206ENST00000489868 PKP1Q13835 747 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 CCDC25Q86WR0 208 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 HERC6Q8IVU3 1022 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 PELI3Q8N2H9 469 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 FSIP1Q8NA03 581 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 SPPL3Q8TCT6 385 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 AFG1LQ8WV93 481 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 CCT6BQ92526 530 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 INPP5DQ92835 1189 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 PPCSQ9HAB8 311 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 DECR2Q9NUI1 292 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 TMLHEQ9NVH6 421 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 SQORQ9Y6N5 450 aa5.7□□□□□ -1.5
CCDC39-206ENST00000489868 TTC3P53804 2025 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 B4DGG1 531 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 STX16-NPEPL1H3BU86 382 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 STX16O14662 325 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 CHRNA5P30532 468 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 PNPLA4P41247 253 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 STAT1P42224 750 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 PRTGQ2VWP7 1150 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 PLK5Q496M5 336 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 EPHA10Q5JZY3 1008 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 LDHAL6AQ6ZMR3 332 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 RINLQ6ZS11 566 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 FTSJ3Q8IY81 847 aaKnown RBP5.69□□□□□ -1.5
CCDC39-206ENST00000489868 C9orf106Q8NAJ2 232 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 CMASQ8NFW8 434 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-206ENST00000489868 TMEM174Q8WUU8 243 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 SDCCAG3Q96C92 435 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 FAM234AQ9H0X4 552 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 THAP1Q9NVV9 213 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 HDAC6Q9UBN7 1215 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 UPB1Q9UBR1 384 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 ANAPC4Q9UJX5 808 aa5.69□□□□□ -1.5
CCDC39-206ENST00000489868 MDM4O15151 490 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 KLRC2P26717 231 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 AARSP49588 968 aaKnown RBP eCLIP5.68□□□□□ -1.5
CCDC39-206ENST00000489868 CCT4P50991 539 aaKnown RBP5.68□□□□□ -1.5
CCDC39-206ENST00000489868 MVDP53602 400 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 KRTAP1-1Q07627 177 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 THOC5Q13769 683 aaKnown RBP5.68□□□□□ -1.5
CCDC39-206ENST00000489868 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 VWA5B1Q5TIE3 1220 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 GALNT7Q86SF2 657 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 PIM3Q86V86 326 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 BRSK2Q8IWQ3 736 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 TMEM199Q8N511 208 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-206ENST00000489868 HIPK3Q9H422 1215 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 PNRC2Q9NPJ4 139 aaKnown RBP5.68□□□□□ -1.5
CCDC39-206ENST00000489868 GPR52Q9Y2T5 361 aa5.68□□□□□ -1.5
CCDC39-206ENST00000489868 CD8B2A6NJW9 211 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 SYN3O14994 580 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 IFNA2P01563 188 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 CRYABP02511 175 aaKnown RBP5.67□□□□□ -1.5
CCDC39-206ENST00000489868 FCGR2AP12318 317 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 RXRAP19793 462 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 POLD2P49005 469 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 OAZ1P54368 228 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 ACTR2P61160 394 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 PPATQ06203 517 aa5.67□□□□□ -1.5
CCDC39-206ENST00000489868 PTGR1Q14914 329 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms