RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 CYTH4Q9UIA0 394 aa10.71□□□□□ -0.69
CHKB-211ENST00000489453 XPO7Q9UIA9 1087 aaKnown RBP10.71□□□□□ -0.69
CHKB-211ENST00000489453 DMTF1Q9Y222 760 aa10.71□□□□□ -0.69
CHKB-211ENST00000489453 ZDHHC9Q9Y397 364 aa10.71□□□□□ -0.69
CHKB-211ENST00000489453 PTPRQQ9UMZ3 2332 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 A0A1B0GVM2 712 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 BICDL2A1A5D9 508 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 TCAF2A6NFQ2 919 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 E5RJQ4 531 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 LATO43561 262 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 BNIP3LO60238 219 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 RTN2O75298 545 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 LETM1O95202 739 aaPredicted RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 VAV1P15498 845 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 CKMT2P17540 419 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 GLDCP23378 1020 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 ITPKBP27987 946 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 ACTN2P35609 894 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 EIF2S3P41091 472 aaKnown RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 RXRGP48443 463 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 YWHAZP63104 245 aaKnown RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 OVGP1Q12889 678 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 BNIP3Q12983 259 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 POM121L1PQ3SYA9 428 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 SYPL2Q5VXT5 272 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 DENND1BQ6P3S1 775 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 FBXL19Q6PCT2 694 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 CCAR2Q8N163 923 aaKnown RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 ERCC4Q92889 916 aaPredicted RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 KLHDC7BQ96G42 594 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 RPRD1AQ96P16 312 aaPredicted RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 FCRL3Q96P31 734 aaPredicted RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 INTS2Q9H0H0 1204 aaKnown RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 THAP9Q9H5L6 903 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHKB-211ENST00000489453 VPS28Q9UK41 221 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 CLCA2Q9UQC9 943 aa10.7□□□□□ -0.7
CHKB-211ENST00000489453 FARP1Q9Y4F1 1045 aaPredicted RBP10.7□□□□□ -0.7
CHKB-211ENST00000489453 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.69□□□□□ -0.7
CHKB-211ENST00000489453 KCNU1A8MYU2 1149 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 PRAMEF26H0Y7S4 382 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 PLRG1O43660 514 aaKnown RBP10.69□□□□□ -0.7
CHKB-211ENST00000489453 TLX3O43711 291 aaPredicted RBP10.69□□□□□ -0.7
CHKB-211ENST00000489453 BRINP1O60477 761 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 SDC3O75056 442 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 GNA14O95837 355 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 AFPP02771 609 aaKnown RBP10.69□□□□□ -0.7
CHKB-211ENST00000489453 GNA15P30679 374 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 CCR1P32246 355 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 DRD3P35462 400 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 USP8P40818 1118 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 GPD2P43304 727 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 E2F1Q01094 437 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 CCDC15Q0P6D6 951 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 MTA1Q13330 715 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 ZNF177Q13360 481 aaPredicted RBP10.69□□□□□ -0.7
CHKB-211ENST00000489453 RTP5Q14D33 572 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 TRIM69Q86WT6 500 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 SPATS2Q86XZ4 545 aaKnown RBP10.69□□□□□ -0.7
CHKB-211ENST00000489453 EHBP1Q8NDI1 1231 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 STK32AQ8WU08 396 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 NELFBQ8WX92 580 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 TSC1Q92574 1164 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 CCDC114Q96M63 670 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 SLC4A5Q9BY07 1137 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 PREBQ9HCU5 417 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 UBE2TQ9NPD8 197 aaPredicted RBP10.69□□□□□ -0.7
CHKB-211ENST00000489453 DYRK4Q9NR20 520 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 EVA1BQ9NVM1 165 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 DDIT4Q9NX09 232 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 CTNND2Q9UQB3 1225 aa10.69□□□□□ -0.7
CHKB-211ENST00000489453 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.69□□□□□ -0.7
CHKB-211ENST00000489453 DOCK4Q8N1I0 1966 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 TK2O00142 265 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 ATXN7O15265 892 aaPredicted RBP10.68□□□□□ -0.7
CHKB-211ENST00000489453 ALOX15BO15296 676 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 SIGLEC6O43699 453 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 RNGTTO60942 597 aaKnown RBP10.68□□□□□ -0.7
CHKB-211ENST00000489453 PRB1P04280 392 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 ALPPL2P10696 532 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 ACP1P24666 158 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 RPL34P49207 117 aaKnown RBP10.68□□□□□ -0.7
CHKB-211ENST00000489453 PLK1P53350 603 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 METAP1P53582 386 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 CCDC173Q0VFZ6 552 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 KCNH2Q12809 1159 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 CNTN1Q12860 1018 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 NME3Q13232 169 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 PDCLQ13371 301 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 DLG2Q15700 870 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 MEA1Q16626 185 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 SFMBT2Q5VUG0 894 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 FBXL22Q6P050 247 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 KDM7AQ6ZMT4 941 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 Q6ZVU0 165 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 SNIP1Q8TAD8 396 aaKnown RBP10.68□□□□□ -0.7
CHKB-211ENST00000489453 LMO3Q8TAP4 145 aa10.68□□□□□ -0.7
CHKB-211ENST00000489453 FRS2Q8WU20 508 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms