RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 DHHO43323 396 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 LDB2O43679 373 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 SERPINI2O75830 405 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 ZBED1O96006 694 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 MYZAPP0CAP1 466 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 IDEP14735 1019 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 ADPRHP54922 357 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 TLE3Q04726 772 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 TROAPQ12815 778 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 KIAA0753Q2KHM9 967 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 ZNF284Q2VY69 593 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 HEPHL1Q6MZM0 1159 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 TMEM71Q6P5X7 295 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 C9orf139Q6ZV77 190 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 CCDC25Q86WR0 208 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 KLBQ86Z14 1044 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 ZNF485Q8NCK3 441 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 CCDC150Q8NCX0 1101 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 LRRC46Q96FV0 321 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 ZIM2Q9NZV7 527 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 AGO1Q9UL18 857 aaKnown RBP3.56□□□□□ -1.84
SMC4-220ENST00000488017 SRPRBQ9Y5M8 271 aaKnown RBP3.56□□□□□ -1.84
SMC4-220ENST00000488017 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
SMC4-220ENST00000488017 IGLV5-37A0A075B6J1 123 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 SAA2-SAA4A0A096LPE2 208 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 IGHV4-28A0A0C4DH34 117 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 MAGEA13PA6NCF6 341 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 MYL4P12829 197 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 HOXC13P31276 330 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 DMP1Q13316 513 aaPredicted RBP3.55□□□□□ -1.84
SMC4-220ENST00000488017 DAG1Q14118 895 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 CSHL1Q14406 222 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 RAP1GAP2Q684P5 730 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 TTC30AQ86WT1 665 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 LRRC57Q8N9N7 239 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 CMASQ8NFW8 434 aaPredicted RBP3.55□□□□□ -1.84
SMC4-220ENST00000488017 SLC35F5Q8WV83 523 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 GFRA4Q9GZZ7 299 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 OSBPL5Q9H0X9 879 aaPredicted RBP3.55□□□□□ -1.84
SMC4-220ENST00000488017 PCDHAC1Q9H158 963 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 MMP28Q9H239 520 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 ACTR5Q9H9F9 607 aaPredicted RBP3.55□□□□□ -1.84
SMC4-220ENST00000488017 PNPLA8Q9NP80 782 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 ZMYND8Q9ULU4 1186 aaPredicted RBP3.55□□□□□ -1.84
SMC4-220ENST00000488017 ADAM18Q9Y3Q7 739 aa3.55□□□□□ -1.84
SMC4-220ENST00000488017 TULP2O00295 520 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 TBX6O95947 436 aaPredicted RBP3.54□□□□□ -1.84
SMC4-220ENST00000488017 CFC1BP0CG36 223 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 CFC1P0CG37 223 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 RNF224P0DH78 156 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 KRT5P13647 590 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 KRT2P35908 639 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 PPP3CCP48454 512 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 NOVP48745 357 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 EPHB1P54762 984 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 ARHGAP29Q52LW3 1261 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 VWA5B1Q5TIE3 1220 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 DGLUCYQ7Z3D6 616 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 ATP11CQ8NB49 1132 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 SLC22A17Q8WUG5 538 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 BICD1Q96G01 975 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 SNX27Q96L92 541 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 PRDM11Q9NQV5 511 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 FBXO4Q9UKT5 387 aa3.54□□□□□ -1.84
SMC4-220ENST00000488017 IGKV3D-20A0A0C4DH25 116 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 A0A1B0GU03 582 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 PRAC2D3DTV9 90 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 ZG16O60844 167 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 APOHP02749 345 aaPredicted RBP3.53□□□□□ -1.84
SMC4-220ENST00000488017 ITGA5P08648 1049 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 EGR1P18146 543 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 C21orf33P30042 268 aaPredicted RBP3.53□□□□□ -1.84
SMC4-220ENST00000488017 HDAC1Q13547 482 aaPredicted RBP3.53□□□□□ -1.84
SMC4-220ENST00000488017 AAK1Q2M2I8 961 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 RETSATQ6NUM9 610 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 CHST15Q7LFX5 561 aaPredicted RBP3.53□□□□□ -1.84
SMC4-220ENST00000488017 PALB2Q86YC2 1186 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 SPATA20Q8TB22 786 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 FBXO17Q96EF6 278 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 ZDHHC7Q9NXF8 308 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 RAP2CQ9Y3L5 183 aa3.53□□□□□ -1.84
SMC4-220ENST00000488017 CYP3A7-CYP3A51PA0A087WV96 503 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 TPP1O14773 563 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 EDIL3O43854 480 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 PECAM1P16284 738 aaPredicted RBP3.52□□□□□ -1.85
SMC4-220ENST00000488017 CYP3A7P24462 503 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 KLRC2P26717 231 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 THPOP40225 353 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 PEX5P50542 639 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 TAS2R50P59544 299 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 RHAGQ02094 409 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 ARHGAP15Q53QZ3 475 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 PPP4R4Q6NUP7 873 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 MON1BQ7L1V2 547 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 NEXN-AS1Q8NBZ9 246 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 PHKBQ93100 1093 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 SCMH1Q96GD3 660 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 GFM1Q96RP9 751 aaKnown RBP3.52□□□□□ -1.85
SMC4-220ENST00000488017 TMEM248Q9NWD8 314 aa3.52□□□□□ -1.85
SMC4-220ENST00000488017 ZBTB1Q9Y2K1 713 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms