RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 KLF15Q9UIH9 416 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 ERVW-1Q9UQF0 538 aa12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
ATPAF1-205ENST00000487193 TBCAO75347 108 aaKnown RBP12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 JUNDP17535 347 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 ADORA2BP29275 332 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 CCKBRP32239 447 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 ADKP55263 362 aaKnown RBP12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 CNTN1Q12860 1018 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 C1orf61Q13536 156 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 FZD2Q14332 565 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 TMEM164Q5U3C3 297 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 ASB18Q6ZVZ8 466 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 TRAPPC11Q7Z392 1133 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 SDR16C5Q8N3Y7 309 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 CPEB1Q9BZB8 566 aaKnown RBP12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 MARCH2Q9P0N8 246 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 STIM2Q9P246 746 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 IPO11Q9UI26 975 aaKnown RBP12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 GGT7Q9UJ14 662 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
ATPAF1-205ENST00000487193 A0A1W2PQM1 296 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 A0A1W2PQU0 124 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 HHLA1C9JL84 531 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 TPP1O14773 563 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 JAK2O60674 1132 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 TBL1XO60907 577 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 ZXDCQ2QGD7 858 aaPredicted RBP12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 ESRP1Q6NXG1 681 aaKnown RBP12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 GCNT7Q6ZNI0 430 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 ZNF720Q7Z2F6 126 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 MCEMP1Q8IX19 187 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 CCDC74AQ96AQ1 378 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 TNIP3Q96KP6 325 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 RPL10LQ96L21 214 aaKnown RBP12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 CDK5RAP1Q96SZ6 601 aaKnown RBP12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 CMKLR1Q99788 373 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 CBWD1Q9BRT8 395 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 SMYD3Q9H7B4 428 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 FAM49BQ9NUQ9 324 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 SARDHQ9UL12 918 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 STRIP2Q9ULQ0 834 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 PPM1HQ9ULR3 514 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 CEP83Q9Y592 693 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
ATPAF1-205ENST00000487193 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 SLC7A4O43246 635 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 GCATO75600 419 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 CLSTN1O94985 981 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 KIF20AO95235 890 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 ASLP04424 464 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 VAV1P15498 845 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 NME1P15531 152 aaKnown RBP12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 HNRNPA2B1P22626 353 aaKnown RBP12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 NUMBP49757 651 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 PSEN1P49768 467 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 MCM6Q14566 821 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 ARID5BQ14865 1188 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 PPP1R26Q5T8A7 1209 aaPredicted RBP12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 AGBL4Q5VU57 503 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 RFWD3Q6PCD5 774 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 RP1L1Q8IWN7 2480 aaPredicted RBP12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 C12orf29Q8N999 325 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 GPBAR1Q8TDU6 330 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 BMFQ96LC9 184 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 ACCSQ96QU6 501 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 LRRN3Q9H3W5 708 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 ST6GALNAC4Q9H4F1 302 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 CLIC5Q9NZA1 410 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 TBC1D7Q9P0N9 293 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 SIRPGQ9P1W8 387 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 INTS6Q9UL03 887 aaKnown RBP12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 NOL7Q9UMY1 257 aaKnown RBP12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 EXOC7Q9UPT5 735 aa12.58□□□□□ -0.4
ATPAF1-205ENST00000487193 A6NNZ2 444 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 TCP11X1B4DZS4 312 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 ANXA6P08133 673 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 HOXB4P17483 251 aaPredicted RBP12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 GARTP22102 1010 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 OAS2P29728 719 aaKnown RBP12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 MYL6P60660 151 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 CDC20Q12834 499 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 BMT2Q1RMZ1 405 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 ATP1A1-AS1Q5TC04 95 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 SCARA5Q6ZMJ2 495 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 CLEC20AQ6ZU45 233 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 ABI3BPQ7Z7G0 1075 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 PARGQ86W56 976 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 DCP2Q8IU60 420 aaKnown RBP12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 MFN1Q8IWA4 741 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 CACNA2D3Q8IZS8 1091 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms