RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 C2P06681 752 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 CHRNGP07510 517 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 F7P08709 466 aaPredicted RBP12.46□□□□□ -0.42
COL3A1-206ENST00000487010 CYP2C8P10632 490 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 MS4A2Q01362 244 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 OLIG2Q13516 323 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 CEACAM7Q14002 265 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 FRG1Q14331 258 aaKnown RBP12.46□□□□□ -0.42
COL3A1-206ENST00000487010 PDK1Q15118 436 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 DLG2Q15700 870 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 SH3D19Q5HYK7 790 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 SEL1L3Q68CR1 1132 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 ISLR2Q6UXK2 745 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 SETD3Q86TU7 594 aaPredicted RBP12.46□□□□□ -0.42
COL3A1-206ENST00000487010 FAM131BQ86XD5 332 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 PGAM4Q8N0Y7 254 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 LILRA2Q8N149 483 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 CCNYQ8ND76 341 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 COPS7BQ9H9Q2 264 aaPredicted RBP12.46□□□□□ -0.42
COL3A1-206ENST00000487010 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.46□□□□□ -0.42
COL3A1-206ENST00000487010 HSFX1Q9UBD0 423 aa12.46□□□□□ -0.42
COL3A1-206ENST00000487010 GNEQ9Y223 722 aaKnown RBP12.46□□□□□ -0.42
COL3A1-206ENST00000487010 ZCWPW2A0A1B0GU75 182 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 PYGLP06737 847 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 ADSLP30566 484 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-206ENST00000487010 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-206ENST00000487010 PPARGP37231 505 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-206ENST00000487010 RPL14P50914 215 aaKnown RBP12.45□□□□□ -0.42
COL3A1-206ENST00000487010 GTF2A2P52657 109 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 HK2P52789 917 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 INHBCP55103 352 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 PKNOX1P55347 436 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 IGBP1P78318 339 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 GK3PQ14409 553 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 MYLK3Q32MK0 819 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 USP41Q3LFD5 358 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 HSP90AA5PQ58FG0 334 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 TMEM135Q86UB9 458 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 C7orf31Q8N865 590 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 BHLHE22Q8NFJ8 381 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-206ENST00000487010 ZFP28Q8NHY6 868 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 DLG3Q92796 817 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 RCN3Q96D15 328 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 PKP2Q99959 881 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 GRIP2Q9C0E4 1043 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 DRC3Q9H069 523 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 DPEP3Q9H4B8 488 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 ZNF385DQ9H6B1 395 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 APPL1Q9UKG1 709 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 G3BP2Q9UN86 482 aaKnown RBP12.45□□□□□ -0.42
COL3A1-206ENST00000487010 DMTF1Q9Y222 760 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
COL3A1-206ENST00000487010 PRSS51A0A1B0GVH4 220 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 PPEF2O14830 753 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 GRID2O43424 1007 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 AMHP03971 560 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 FAM58BPP0C7Q3 252 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 ATP6V1B1P15313 513 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 ME2P23368 584 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 EPHA3P29320 983 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 ABCG1P45844 678 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 HSPA13P48723 471 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 RPL34P49207 117 aaKnown RBP12.44□□□□□ -0.42
COL3A1-206ENST00000487010 CREB5Q02930 508 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 BST2Q10589 180 aaKnown RBP12.44□□□□□ -0.42
COL3A1-206ENST00000487010 APOFQ13790 326 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 HERC3Q15034 1050 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 C6orf52Q5T4I8 152 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 ZYG11AQ6WRX3 759 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 PID1Q7Z2X4 250 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 PSTKQ8IV42 348 aaKnown RBP12.44□□□□□ -0.42
COL3A1-206ENST00000487010 ANKRD52Q8NB46 1076 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 OR6B3Q8NGW1 331 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 DDI1Q8WTU0 396 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 RNF139Q8WU17 664 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 COPS5Q92905 334 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 MOCOSQ96EN8 888 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 PPP1R36Q96LQ0 422 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 SPATC1LQ9H0A9 340 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 IRAK4Q9NWZ3 460 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 BFARQ9NZS9 450 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 MID2Q9UJV3 735 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 VANGL2Q9ULK5 521 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 PLXNA1Q9UIW2 1896 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 CCDC160A6NGH7 325 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 CFLARO15519 480 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 TIMM44O43615 452 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 BCAS2O75934 225 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-206ENST00000487010 PIGNO95427 931 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 APOA4P06727 396 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 ENO3P13929 434 aaPredicted RBP12.44□□□□□ -0.42
COL3A1-206ENST00000487010 TFEBP19484 476 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 ADORA2BP29275 332 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 DPP6P42658 865 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 GRIA4P48058 902 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 BCAT1P54687 386 aa12.44□□□□□ -0.42
COL3A1-206ENST00000487010 CDKL1Q00532 357 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms