RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 STEAP4Q687X5 459 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 NXNQ6DKJ4 435 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 PPP4R4Q6NUP7 873 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CYP2R1Q6VVX0 501 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 SCARA5Q6ZMJ2 495 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 SIX6OS1Q8N1H7 587 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TRUB1Q8WWH5 349 aaKnown RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 STARD8Q92502 1023 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 LPGAT1Q92604 370 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CDKL2Q92772 493 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 GATA5Q9BWX5 397 aaPredicted RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 PALMDQ9NP74 551 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 SNX15Q9NRS6 342 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 SMOXQ9NWM0 555 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TCEAL9Q9UHQ7 104 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 GIT1Q9Y2X7 761 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 PCDHGA7Q9Y5G6 932 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TANC1Q9C0D5 1861 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TRIM64A6NGJ6 449 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 E7ENX8 843 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 NFIBO00712 420 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 DLGAP1O14490 977 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 SLC22A2O15244 555 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 AQP9O43315 295 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TRIM13O60858 407 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TIPRLO75663 272 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 F7P08709 466 aaPredicted RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CD19P15391 556 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TPSB2P20231 275 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 EPHX2P34913 555 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 PSME3P61289 254 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 NME3Q13232 169 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 HERC3Q15034 1050 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TPSAB1Q15661 275 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 SEL1L3Q68CR1 1132 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 KCNT2Q6UVM3 1135 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 ILDR2Q71H61 639 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 ZC3H7AQ8IWR0 971 aaKnown RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 FAM110BQ8TC76 370 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 ACDQ96AP0 544 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 PPWD1Q96BP3 646 aaKnown RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 UHRF1Q96T88 793 aaPredicted RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 APBA2Q99767 749 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 MSTO1Q9BUK6 570 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TDRD1Q9BXT4 1180 aaKnown RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CCDC68Q9H2F9 335 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 PDLIM7Q9NR12 457 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 FBXO28Q9NVF7 368 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 ASNSD1Q9NWL6 643 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 GPATCH2LQ9NWQ4 482 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CNOT6Q9ULM6 557 aaKnown RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 RBMX2Q9Y388 322 aaKnown RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CCDC162PA2VCL2 907 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 APOL1O14791 398 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SNAP91O60641 907 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 JUNP05412 331 aaKnown RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 PABPC1P11940 636 aaKnown RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 TFEBP19484 476 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 MYF6P23409 242 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SLC7A1P30825 629 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 RPL14P50914 215 aaKnown RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 JAK3P52333 1124 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 MAPK10P53779 464 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 IRF9Q00978 393 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 VPS72Q15906 364 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 C15orf59Q2T9L4 293 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 TREML2Q5T2D2 321 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 CNTD1Q8N815 330 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 PCDH19Q8TAB3 1148 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 CERKQ8TCT0 537 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 TAMM41Q96BW9 452 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ATXN7L3BQ96GX2 97 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 MASTLQ96GX5 879 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ZDHHC15Q96MV8 337 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 IDI2Q9BXS1 227 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 POLR3FQ9H1D9 316 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 POLR1BQ9H9Y6 1135 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SACM1LQ9NTJ5 587 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 RIC8BQ9NVN3 520 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SUCOQ9UBS9 1254 aaKnown RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SFMBT1Q9UHJ3 866 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ZDHHC2Q9UIJ5 367 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 CROTQ9UKG9 612 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 HES2Q9Y543 173 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 COPG1Q9Y678 874 aaKnown RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SLC30A1Q9Y6M5 507 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 C1orf232A0A0U1RR37 186 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 TCRBV3S1A0A5B6 114 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 KCNU1A8MYU2 1149 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 NRP1O14786 923 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 STBD1O95210 358 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ERVK-10P10266 1014 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ADSLP30566 484 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 RALGDSQ12967 914 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 NFATC3Q12968 1075 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SEPT6Q14141 434 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 CDO1Q16878 200 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 C6orf183Q5T699 404 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms