RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 H0Y626 953 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.51
HPS4-212ENST00000481910 ERLIN1O75477 346 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 CLDN11O75508 207 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 PENKP01210 267 aaPredicted RBP11.9□□□□□ -0.51
HPS4-212ENST00000481910 KRT10P13645 584 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 RHOQP17081 205 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 ERCC2P18074 760 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 HOXD9P28356 352 aaPredicted RBP11.9□□□□□ -0.51
HPS4-212ENST00000481910 OR1E1P30953 314 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 HOXC13P31276 330 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 CDKN2BP42772 138 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 CDH4P55283 916 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 COPS2P61201 443 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 ZNF177Q13360 481 aaPredicted RBP11.9□□□□□ -0.51
HPS4-212ENST00000481910 CAMK2BQ13554 666 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 E2F5Q15329 346 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 DCAF12L1Q5VU92 463 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 KAZNQ674X7 775 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 AADACL2Q6P093 401 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 ANKS1BQ7Z6G8 1248 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 VSIG1Q86XK7 387 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 CARNMT1Q8N4J0 409 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 NAT16Q8N8M0 369 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.51
HPS4-212ENST00000481910 RNF157Q96PX1 679 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 CARD9Q9H257 536 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 ARHGEF4Q9NR80 690 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 NEU3Q9UQ49 428 aa11.9□□□□□ -0.51
HPS4-212ENST00000481910 ZNF487B1APH4 448 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 ZSCAN9O15535 394 aaPredicted RBP11.89□□□□□ -0.51
HPS4-212ENST00000481910 NARSO43776 548 aaKnown RBP11.89□□□□□ -0.51
HPS4-212ENST00000481910 TUBB4AP04350 444 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 IVLP07476 585 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 CDH18Q13634 790 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 DPYSQ14117 519 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 SEL1L2Q5TEA6 688 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 CCDC80Q76M96 950 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 CHST9Q7L1S5 443 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 RFX6Q8HWS3 928 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 MFN1Q8IWA4 741 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
HPS4-212ENST00000481910 XPO6Q96QU8 1125 aaKnown RBP11.89□□□□□ -0.51
HPS4-212ENST00000481910 HEMGNQ9BXL5 484 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 TMEM248Q9NWD8 314 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 SORCS3Q9UPU3 1222 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 TICRRQ7Z2Z1 1910 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 NUP205Q92621 2012 aa11.89□□□□□ -0.51
HPS4-212ENST00000481910 SPTBN5Q9NRC6 3674 aaKnown RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 hCG_1818297A0A087WSY0 165 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 KIF2AO00139 706 aaPredicted RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 FANCGO15287 622 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 HOXC11O43248 304 aaPredicted RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 LUC7L3O95232 432 aaKnown RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 SRFP11831 508 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 GJA4P35212 333 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 PFKPQ01813 784 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 PPP2R5EQ16537 467 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 PAPD7Q5XG87 772 aaKnown RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 TMCO3Q6UWJ1 677 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 NLRP14Q86W24 1093 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 RNF135Q8IUD6 432 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
HPS4-212ENST00000481910 GJD3Q8N144 294 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 FAF2Q96CS3 445 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 OSBPL9Q96SU4 736 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 OSBPL8Q9BZF1 889 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 ETNK2Q9NVF9 386 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 FBXO9Q9UK97 447 aaPredicted RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 CLEC4EQ9ULY5 219 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 RABL2BQ9UNT1 228 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 ATP8A1Q9Y2Q0 1164 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 RRP15Q9Y3B9 282 aaKnown RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 APOL1O14791 398 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 CEP104O60308 925 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 CACNG3O60359 315 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 CST8O60676 142 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 TCP1P17987 556 aaKnown RBP11.88□□□□□ -0.51
HPS4-212ENST00000481910 DYNLT1P63172 113 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 TFDP2Q14188 446 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 TAZQ16635 292 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 PQLC3Q8N755 202 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 VPS37AQ8NEZ2 397 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 FIBINQ8TAL6 211 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 MIPOL1Q8TD10 442 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 DNASE1L2Q92874 299 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 PBKQ96KB5 322 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 SLC2A4RGQ9NR83 387 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 HEBP1Q9NRV9 189 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 EFR3BQ9Y2G0 817 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 TBC1D30Q9Y2I9 924 aa11.88□□□□□ -0.51
HPS4-212ENST00000481910 SAR1BQ9Y6B6 198 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms