RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CFAP74Q9C0B2 1584 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 ZNF521Q96K83 1311 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 ACACBO00763 2458 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 HECTD1Q9ULT8 2610 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 SPEGQ15772 3267 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 KIF28PB7ZC32 967 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 H0YGN5 161 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 M0QZQ0 153 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 MOSPD3O75425 235 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 TCEA3O75764 348 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 ACTL6BO94805 426 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 PLAUP00749 431 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 THBS4P35443 961 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 CHKAP35790 457 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 CFHR1Q03591 330 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 FOXO1Q12778 655 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 RABEP1Q15276 862 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 AAK1Q2M2I8 961 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 BTBD16Q32M84 506 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 TUBB8Q3ZCM7 444 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 TRIM60Q495X7 471 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 GLE1Q53GS7 698 aaKnown RBP4.12□□□□□ -1.75
COPA-204ENST00000481522 ZNF569Q5MCW4 686 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 ANKRD40Q6AI12 368 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 LIN54Q6MZP7 749 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 WDR93Q6P2C0 686 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 C16orf89Q6UX73 402 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 ZNF517Q6ZMY9 492 aaPredicted RBP4.12□□□□□ -1.75
COPA-204ENST00000481522 ZNF793Q6ZN11 406 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 RINLQ6ZS11 566 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 RAB11FIP2Q7L804 512 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 MRPL10Q7Z7H8 261 aaKnown RBP4.12□□□□□ -1.75
COPA-204ENST00000481522 ANKRD13BQ86YJ7 626 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 CCDC117Q8IWD4 279 aaPredicted RBP4.12□□□□□ -1.75
COPA-204ENST00000481522 DEFB123Q8N688 67 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 REXO5Q96IC2 774 aaKnown RBP4.12□□□□□ -1.75
COPA-204ENST00000481522 SIGLEC11Q96RL6 698 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 WACQ9BTA9 647 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 MAGEH1Q9H213 219 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 CCDC134Q9H6E4 229 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 PTPRHQ9HD43 1115 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 MTMR10Q9NXD2 777 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 MTMR4Q9NYA4 1195 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 PKD1L3Q7Z443 1732 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 PTPRUQ92729 1446 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 SCAPERQ9BY12 1400 aa4.12□□□□□ -1.75
COPA-204ENST00000481522 CCDC88BA6NC98 1476 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 MYOM2P54296 1465 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 ARHGAP35Q9NRY4 1499 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 TOP2AP11388 1531 aaKnown RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 ERICH3Q5RHP9 1530 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 XIRP2A4UGR9 3374 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 LOC105369274A0A096LPK9 316 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 LOC102723532A0A0G2JNH3 316 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 EFCAB8A8MWE9 144 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 PRYO14603 147 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 RRHO14718 337 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 NKX2-8O15522 239 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 PPP6R2O75170 966 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 LARGE1O95461 756 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 GYS1P13807 737 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 ST6GAL1P15907 406 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 HOXD12P35452 270 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 CPA2P48052 419 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 AGTR2P50052 363 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 CCT4P50991 539 aaKnown RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 SLC12A2P55011 1212 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 AP2B1P63010 937 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 SF3A3Q12874 501 aaKnown RBP eCLIP4.11□□□□□ -1.75
COPA-204ENST00000481522 MTA1Q13330 715 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 STIM1Q13586 685 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 RUSC1-AS1Q66K80 236 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 NFRKBQ6P4R8 1299 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 KYAT3Q6YP21 454 aaKnown RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 SLC44A2Q8IWA5 706 aaPredicted RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 OR4N4Q8N0Y3 316 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 SRFBP1Q8NEF9 429 aaKnown RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 HMGB4Q8WW32 186 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 ASB12Q8WXK4 309 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 MCRS1Q96EZ8 462 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 HMCESQ96FZ2 354 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 ZNF48Q96MX3 618 aaPredicted RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 PAGR1Q9BTK6 254 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 ELOVL1Q9BW60 279 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 SPRTNQ9H040 489 aaPredicted RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 BRD8Q9H0E9 1235 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 PABPC3Q9H361 631 aaKnown RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 AGO4Q9HCK5 861 aaKnown RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 PRDM8Q9NQV8 689 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 TMEM184CQ9NVA4 438 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 GRHPRQ9UBQ7 328 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 CNTN6Q9UQ52 1028 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 ZBTB1Q9Y2K1 713 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 ASPMQ8IZT6 3477 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 RGPD3A6NKT7 1758 aaPredicted RBP4.11□□□□□ -1.75
COPA-204ENST00000481522 RGPD4Q7Z3J3 1758 aa4.11□□□□□ -1.75
COPA-204ENST00000481522 FMN2Q9NZ56 1722 aa4.1□□□□□ -1.75
COPA-204ENST00000481522 C3orf70A6NLC5 250 aaPredicted RBP4.1□□□□□ -1.75
COPA-204ENST00000481522 M0QYT0 321 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms