RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 RPRD1AQ96P16 312 aaPredicted RBP23.2■■□□□ 1.3
TMED4-205ENST00000481238 PAFAH2Q99487 392 aa23.2■■□□□ 1.3
TMED4-205ENST00000481238 ZNF212Q9UDV6 495 aa23.2■■□□□ 1.3
TMED4-205ENST00000481238 IPO11Q9UI26 975 aaKnown RBP23.2■■□□□ 1.3
TMED4-205ENST00000481238 TTLL3Q9Y4R7 772 aa23.2■■□□□ 1.3
TMED4-205ENST00000481238 PTPRSQ13332 1948 aa23.2■■□□□ 1.3
TMED4-205ENST00000481238 SRRM3A6NNA2 597 aaPredicted RBP23.19■■□□□ 1.3
TMED4-205ENST00000481238 CNPP09543 421 aaKnown RBP23.19■■□□□ 1.3
TMED4-205ENST00000481238 PRKCHP24723 683 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 MSH2P43246 934 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 SLC11A2P49281 568 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 LEKR1Q6ZMV7 388 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 UNC5AQ6ZN44 842 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 TRABD2AQ86V40 505 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 CCNJLQ8IV13 435 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 STAMBPL1Q96FJ0 436 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 RAD9AQ99638 391 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 MLPHQ9BV36 600 aaPredicted RBP23.19■■□□□ 1.3
TMED4-205ENST00000481238 RETREG1Q9H6L5 497 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 PCDHA11Q9Y5I1 949 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 OAS1P00973 400 aaKnown RBP23.19■■□□□ 1.3
TMED4-205ENST00000481238 CHN1P15882 459 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 SPARCL1Q14515 664 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 ANO4Q32M45 955 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 CYS1Q717R9 158 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 ITIH5Q86UX2 942 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 SP7Q8TDD2 431 aaPredicted RBP23.19■■□□□ 1.3
TMED4-205ENST00000481238 USP33Q8TEY7 942 aa23.19■■□□□ 1.3
TMED4-205ENST00000481238 FOXO6A8MYZ6 492 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 RASA4BC9J798 803 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 F5H5T6 163 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 RASA4O43374 803 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 CXCL14O95715 111 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 C1QAP02745 245 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 CREB1P16220 341 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 MAPKAPK2P49137 400 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 KBTBD12Q3ZCT8 623 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 HERC6Q8IVU3 1022 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 SRRM1Q8IYB3 904 aaKnown RBP23.18■■□□□ 1.3
TMED4-205ENST00000481238 GSDMBQ8TAX9 411 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 PHOSPHO2Q8TCD6 241 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 DCAKDQ8WVC6 231 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 SLC44A1Q8WWI5 657 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 HERVK_113Q902F9 699 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 MRRFQ96E11 262 aaKnown RBP23.18■■□□□ 1.3
TMED4-205ENST00000481238 FCRL5Q96RD9 977 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 NAT9Q9BTE0 207 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 KLF16Q9BXK1 252 aaPredicted RBP23.18■■□□□ 1.3
TMED4-205ENST00000481238 MCOLN1Q9GZU1 580 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 RNF38Q9H0F5 515 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 CASS4Q9NQ75 786 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 SENP1Q9P0U3 644 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 ASB3Q9Y575 518 aa23.18■■□□□ 1.3
TMED4-205ENST00000481238 TGM5O43548 720 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 F11P03951 625 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 BRAFP15056 766 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 MGAT1P26572 445 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 IFNAR2P48551 515 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 SESN2P58004 480 aaPredicted RBP23.17■■□□□ 1.3
TMED4-205ENST00000481238 PPARDQ03181 441 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 STEAP4Q687X5 459 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 OTOP3Q7RTS5 596 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 TMEM150AQ86TG1 271 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 PRPF39Q86UA1 669 aaKnown RBP23.17■■□□□ 1.3
TMED4-205ENST00000481238 ARNTL2Q8WYA1 636 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 MYEOVQ96EZ4 313 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 HMCESQ96FZ2 354 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 GLOD4Q9HC38 313 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 RBM22Q9NW64 420 aaKnown RBP eCLIP23.17■■□□□ 1.36e-7■■■■□ 20.6
TMED4-205ENST00000481238 AAR2Q9Y312 384 aaKnown RBP23.17■■□□□ 1.3
TMED4-205ENST00000481238 KRT15P19012 456 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 CA8P35219 290 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 PABPC1LQ4VXU2 614 aaKnown RBP23.17■■□□□ 1.3
TMED4-205ENST00000481238 FAM133BQ5BKY9 247 aaKnown RBP23.17■■□□□ 1.3
TMED4-205ENST00000481238 LILRA6Q6PI73 481 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 LGI2Q8N0V4 545 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 OR52K1Q8NGK4 314 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 PPP1R2P1Q96PQ5 205 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 LRRC40Q9H9A6 602 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 SLC4A7Q9Y6M7 1214 aa23.17■■□□□ 1.3
TMED4-205ENST00000481238 MYO18AQ92614 2054 aaKnown RBP23.16■■□□□ 1.3
TMED4-205ENST00000481238 KIAA1671Q9BY89 1806 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 TMEM120BA0PK00 339 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 C2orf78A6NCI8 922 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 AP3B1O00203 1094 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 PIAS1O75925 651 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 STC2O76061 302 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 PEX11BO96011 259 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 SPATA31D3P0C874 917 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 SLC6A4P31645 630 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 YBEYP58557 167 aaPredicted RBP23.16■■□□□ 1.3
TMED4-205ENST00000481238 DMTNQ08495 405 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 HNRNPDQ14103 355 aaKnown RBP23.16■■□□□ 1.3
TMED4-205ENST00000481238 PARP15Q460N3 678 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 SPATA31D4Q6ZUB0 917 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 TMC7Q7Z402 723 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 OXNAD1Q96HP4 312 aaPredicted RBP23.16■■□□□ 1.3
TMED4-205ENST00000481238 KLHL5Q96PQ7 755 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 EPN3Q9H201 632 aa23.16■■□□□ 1.3
TMED4-205ENST00000481238 GKN1Q9NS71 199 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms