RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 JMJD4Q9H9V9 463 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 ZNF556Q9HAH1 456 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 SLC27A5Q9Y2P5 690 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 AUP1Q9Y679 476 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 CLUHO75153 1309 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 NWD2Q9ULI1 1742 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 SLC22A2O15244 555 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 YES1P07947 543 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 H2AFZP0C0S5 128 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 JUNBP17275 347 aaPredicted RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PTPN1P18031 435 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 GRIA3P42263 894 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 TRAPPC10P48553 1259 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 HOXA1P49639 335 aaPredicted RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 NUBP1P53384 320 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PPATQ06203 517 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 NME3Q13232 169 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 CTTNQ14247 550 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 KIZQ2M2Z5 673 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 TYSND1Q2T9J0 566 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PLEKHM3Q6ZWE6 761 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 H2AFVQ71UI9 128 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 SGMS1Q86VZ5 419 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 ZCCHC7Q8N3Z6 543 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PHOSPHO2Q8TCD6 241 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 STN1Q9H668 368 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 MAGEF1Q9HAY2 307 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 CABP5Q9NP86 173 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 SMOXQ9NWM0 555 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.55□□□□□ -0.723e-9■■□□□ 12
PRPF4B-206ENST00000481109 SFMBT1Q9UHJ3 866 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 UBAP1LF5GYI3 381 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 E2F3O00716 465 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 RIMBP2O15034 1052 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 ZBTB43O43298 467 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 ZNF623O75123 536 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 KCNK2O95069 426 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 DHRS4L1P0CG22 281 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 TRAPPC2P0DI81 140 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 TRAPPC2BP0DI82 140 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 ITGALP20701 1170 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 ADRA1DP25100 572 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 GCAP28676 217 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 RFC4P35249 363 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 GRM5P41594 1212 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 SERPINH1P50454 418 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 COPAP53621 1224 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 EPHB1P54762 984 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 SLC25A3Q00325 362 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 KCTD19Q17RG1 926 aaPredicted RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 VWA5B1Q5TIE3 1220 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PM20D1Q6GTS8 502 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 OR7E24Q6IFN5 339 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 CENPPQ6IPU0 288 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 XKRXQ6PP77 449 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 TMPRSS9Q7Z410 1059 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 STK32CQ86UX6 486 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 CATSPER3Q86XQ3 398 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 KCNH5Q8NCM2 988 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 SHKBP1Q8TBC3 707 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 TESCQ96BS2 214 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 DCPSQ96C86 337 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 ZFYVE19Q96K21 471 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PPA2Q9H2U2 334 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 MCCC2Q9HCC0 563 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 POLE3Q9NRF9 147 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 FAM217BQ9NTX9 383 aaPredicted RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 DDX28Q9NUL7 540 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 MAN2B2Q9Y2E5 1009 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PRELID3BQ9Y3B1 194 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 PCDHB13Q9Y5F0 798 aa10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.55□□□□□ -0.72
PRPF4B-206ENST00000481109 EXOC1LA0A1B0GW35 172 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 HMX3A6NHT5 357 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 KRT15P19012 456 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 MAOBP27338 520 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 CD40LGP29965 261 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 PPP1R26Q5T8A7 1209 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 ZNF438Q7Z4V0 828 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 TFAP2DQ7Z6R9 452 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 C12orf56Q8IXR9 622 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 TRIM22Q8IYM9 498 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 MICU2Q8IYU8 434 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 TMEM102Q8N9M5 508 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 SMG7Q92540 1137 aaKnown RBP10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 GMLQ99445 158 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 MLPHQ9BV36 600 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 SLC26A6Q9BXS9 759 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 YTHDF1Q9BYJ9 559 aaKnown RBP10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 FETUBQ9UGM5 382 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 SERPINB13Q9UIV8 391 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 GMPPBQ9Y5P6 360 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 ATAD5Q96QE3 1844 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 C7orf72A4D263 438 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 PRR5-ARHGAP8B1AHC4 643 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 POC1B-GALNT4F8VUJ3 575 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 EYA2O00167 538 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 AXIN1O15169 862 aa10.54□□□□□ -0.72
PRPF4B-206ENST00000481109 SEC14L2O76054 403 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms