RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TXNDC16Q9P2K2 825 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 COQ4Q9Y3A0 265 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 GOLGA8CPA6NN73 597 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 TPP1O14773 563 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 HOXC11O43248 304 aaPredicted RBP21.64■■□□□ 1.05
SDF4-206ENST00000478938 NUAK1O60285 661 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 ARL1P40616 181 aaPredicted RBP21.64■■□□□ 1.05
SDF4-206ENST00000478938 PRKAA2P54646 552 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 NME5P56597 212 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 RALGDSQ12967 914 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 CCDC81Q6ZN84 652 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 PCDH20Q8N6Y1 951 aaKnown RBP21.64■■□□□ 1.05
SDF4-206ENST00000478938 ACCSQ96QU6 501 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 HMG20AQ9NP66 347 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 ACSS2Q9NR19 701 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 PCDHAC2Q9Y5I4 1007 aa21.64■■□□□ 1.05
SDF4-206ENST00000478938 HSPA4LO95757 839 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 PRKCAP17252 672 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 ZNF76P36508 570 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 SPCS2Q15005 226 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 LRRC38Q5VT99 294 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 IQSEC1Q6DN90 963 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 ZNF280DQ6N043 979 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 SLC22A16Q86VW1 577 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 DOT1LQ8TEK3 1739 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 DEPDC1BQ8WUY9 529 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 SNX19Q92543 992 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 TMEM206Q9H813 350 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 TUFT1Q9NNX1 390 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 ALDOAP04075 364 aaKnown RBP21.63■■□□□ 1.05
SDF4-206ENST00000478938 OCA2Q04671 838 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 MERTKQ12866 999 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 SMAD1Q15797 465 aaKnown RBP21.63■■□□□ 1.05
SDF4-206ENST00000478938 UGT3A1Q6NUS8 523 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 PRR23BQ6ZRT6 265 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 SV2AQ7L0J3 742 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 RALGPS2Q86X27 583 aaPredicted RBP21.63■■□□□ 1.05
SDF4-206ENST00000478938 ZFP90Q8TF47 636 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 NACC1Q96RE7 527 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 AKIP1Q9NQ31 210 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 RAB6BQ9NRW1 208 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 HACD3Q9P035 362 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 ZNF229Q9UJW7 825 aa21.63■■□□□ 1.05
SDF4-206ENST00000478938 UFL1O94874 794 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 EPHX2P34913 555 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 IST1P53990 364 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 COPZ1P61923 177 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 ZNF677Q86XU0 584 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 UNC5BQ8IZJ1 945 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 TRIB2Q92519 343 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 LPGAT1Q92604 370 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 MOCOSQ96EN8 888 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 CNDP1Q96KN2 507 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 MOV10Q9HCE1 1003 aaKnown RBP21.62■■□□□ 1.05
SDF4-206ENST00000478938 ZNF358Q9NW07 568 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 CDY2AQ9Y6F7 541 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 CDY1Q9Y6F8 540 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 TRDMT1O14717 391 aaKnown RBP21.62■■□□□ 1.05
SDF4-206ENST00000478938 GLRA3O75311 464 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 PARNO95453 639 aaKnown RBP21.62■■□□□ 1.05
SDF4-206ENST00000478938 OSBPP22059 807 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 ACADSBP45954 432 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 TRIM25Q14258 630 aaKnown RBP21.62■■□□□ 1.05
SDF4-206ENST00000478938 STILQ15468 1287 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 PPM1JQ5JR12 505 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 RSBN1LQ6PCB5 846 aaPredicted RBP21.62■■□□□ 1.05
SDF4-206ENST00000478938 NAPRTQ6XQN6 538 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 TP53INP1Q96A56 240 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 NEK6Q9HC98 313 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 THG1LQ9NWX6 298 aaKnown RBP21.62■■□□□ 1.05
SDF4-206ENST00000478938 TMEM216Q9P0N5 145 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 COPG2Q9UBF2 871 aa21.62■■□□□ 1.05
SDF4-206ENST00000478938 CRNNQ9UBG3 495 aaPredicted RBP21.62■■□□□ 1.05
SDF4-206ENST00000478938 ARHGEF35A5YM69 484 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 ZSCAN5BA6NJL1 495 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 WDR64B1ANS9 1081 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 TIMM44O43615 452 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 FYNP06241 537 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 HOXA13P31271 388 aaPredicted RBP21.61■■□□□ 1.05
SDF4-206ENST00000478938 AP3B2Q13367 1082 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 TMTC4Q5T4D3 741 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 BBS12Q6ZW61 710 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 PHF13Q86YI8 300 aaPredicted RBP21.61■■□□□ 1.05
SDF4-206ENST00000478938 CCDC24Q8N4L8 307 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 CLSTN3Q9BQT9 956 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 ZBED2Q9BTP6 218 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 C1orf112Q9NSG2 853 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 MRGBPQ9NV56 204 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 TRPC5Q9UL62 973 aaPredicted RBP21.61■■□□□ 1.05
SDF4-206ENST00000478938 PCDHGC3Q9UN70 934 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 TAF4O00268 1085 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 B4GAT1O43505 415 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 ADORA2AP29274 412 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 SLC7A1P30825 629 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 GTF2IP78347 998 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 AQP6Q13520 282 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 GPR162Q16538 588 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 DCUN1D2Q6PH85 259 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 NPNTQ6UXI9 565 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 OTOP1Q7RTM1 612 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms