RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 BEND5Q7L4P6 421 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 C11orf96Q7Z7L8 435 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 ANKRD13CQ8N6S4 541 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 LINC01465Q8N7H1 131 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 TDRD7Q8NHU6 1098 aaKnown RBP5.31□□□□□ -1.56
VPS50-214ENST00000477935 MBD3L2Q8NHZ7 208 aaPredicted RBP5.31□□□□□ -1.56
VPS50-214ENST00000477935 TRIB2Q92519 343 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 LPAR1Q92633 364 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 FYTTD1Q96QD9 318 aaKnown RBP5.31□□□□□ -1.56
VPS50-214ENST00000477935 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 MAGEB5Q9BZ81 275 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 SEMA4CQ9C0C4 833 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 HYPKQ9NX55 129 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 TSPYL4Q9UJ04 414 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 LAMB2P55268 1798 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 MYO9BQ13459 2157 aa5.31□□□□□ -1.56
VPS50-214ENST00000477935 ZSWIM8A7E2V4 1837 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 ADAMTS3O15072 1205 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 GCATO75600 419 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 MT-CO3P00414 261 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 MYL1P05976 194 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 HMGB1P09429 215 aaKnown RBP5.3□□□□□ -1.56
VPS50-214ENST00000477935 CYP2D6P10635 497 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 CYP2A6P11509 494 aaPredicted RBP5.3□□□□□ -1.56
VPS50-214ENST00000477935 MYL4P12829 197 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
VPS50-214ENST00000477935 CYP2B6P20813 491 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 MPGP29372 298 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 ABCG1P45844 678 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 FHL3Q13643 280 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 RAB30Q15771 203 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 CEP78Q5JTW2 689 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 CCDC129Q6ZRS4 1044 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 FSTL5Q8N475 847 aaPredicted RBP5.3□□□□□ -1.56
VPS50-214ENST00000477935 C8orf58Q8NAV2 365 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 ADAMTS18Q8TE60 1221 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 MPHOSPH8Q99549 860 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 CWC25Q9NXE8 425 aaPredicted RBP5.3□□□□□ -1.56
VPS50-214ENST00000477935 DBF4Q9UBU7 674 aaPredicted RBP5.3□□□□□ -1.56
VPS50-214ENST00000477935 ZHX2Q9Y6X8 837 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 USP34Q70CQ2 3546 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 SPTBN4Q9H254 2564 aa5.3□□□□□ -1.56
VPS50-214ENST00000477935 CFAP54Q96N23 3096 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 USP1O94782 785 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 TUBB4AP04350 444 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 NBPF7P0C2Y1 421 aaPredicted RBP5.29□□□□□ -1.56
VPS50-214ENST00000477935 TMEM225BP0DP42 221 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 ARP10275 920 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 TNFSF4P23510 183 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 RGS2P41220 211 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 GPS1Q13098 491 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 LONRF1Q17RB8 773 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 ARL13BQ3SXY8 428 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 FAM209BQ5JX69 171 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 HIBCHQ6NVY1 386 aaPredicted RBP5.29□□□□□ -1.56
VPS50-214ENST00000477935 PNPLA1Q8N8W4 532 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 CCDC150Q8NCX0 1101 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 SUN3Q8TAQ9 357 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 PARD3BQ8TEW8 1205 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 FAM151AQ8WW52 585 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 VPS50Q96JG6 964 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 CCDC17Q96LX7 622 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 C5orf34Q96MH7 638 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 SH2D3AQ9BRG2 576 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 PNNQ9H307 717 aaKnown RBP5.29□□□□□ -1.56
VPS50-214ENST00000477935 SLC28A3Q9HAS3 691 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 ARNT2Q9HBZ2 717 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 ZBTB26Q9HCK0 441 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 AGTPBP1Q9UPW5 1226 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 AFG3L2Q9Y4W6 797 aa5.29□□□□□ -1.56
VPS50-214ENST00000477935 DDX60LQ5H9U9 1706 aaKnown RBP5.28□□□□□ -1.56
VPS50-214ENST00000477935 ZFHX2Q9C0A1 2572 aaPredicted RBP5.28□□□□□ -1.56
VPS50-214ENST00000477935 EPG5Q9HCE0 2579 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 DNAJC9-AS1A6NH13 148 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 RASA4BC9J798 803 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 PPP6CO00743 305 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 RASA4O43374 803 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 NCK2O43639 380 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 COQ9O75208 318 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 WDR47O94967 919 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 HOXB7P09629 217 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 PRR35P0CG20 571 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 ADRA1DP25100 572 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 KLRK1P26718 216 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 MST1P26927 711 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 GABRB3P28472 473 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 CCND3P30281 292 aaPredicted RBP5.28□□□□□ -1.56
VPS50-214ENST00000477935 MAPK4P31152 587 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 CFHR3Q02985 330 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 PMS2P11Q13670 270 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 SRSF7Q16629 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS50-214ENST00000477935 C4orf46Q504U0 113 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 CC2D1BQ5T0F9 858 aaKnown RBP5.28□□□□□ -1.56
VPS50-214ENST00000477935 FAXCQ5TGI0 409 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 MFSD14CQ5VZR4 134 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 IL31Q6EBC2 164 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 ABLIM2Q6H8Q1 611 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 MRNIPQ6NTE8 343 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 TMEM65Q6PI78 240 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 USP17L6PQ6QN14 398 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms