RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GRK6P43250 576 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 BNIP3Q12983 259 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 DNAJC3Q13217 504 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 COL9A2Q14055 689 aaPredicted RBP12.01□□□□□ -0.49
VARS2-208ENST00000477052 ARID5BQ14865 1188 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 EXOC3L4Q17RC7 722 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 C2CD6Q53TS8 623 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 OLFML1Q6UWY5 402 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 Q6ZVU0 165 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 ENOSF1Q7L5Y1 443 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 TMPRSS7Q7RTY8 843 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 HNRNPLLQ8WVV9 542 aaKnown RBP12.01□□□□□ -0.49
VARS2-208ENST00000477052 KLK6Q92876 244 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 ALG14Q96F25 216 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 ELF4Q99607 663 aaPredicted RBP12.01□□□□□ -0.49
VARS2-208ENST00000477052 MYOCQ99972 504 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 ADAMTS1Q9UHI8 967 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 SLC12A6Q9UHW9 1150 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 DNAJC12Q9UKB3 198 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 SCML1Q9UN30 329 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 DOCK9Q9BZ29 2069 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 A0A1B0GTQ1 180 aa12□□□□□ -0.49
VARS2-208ENST00000477052 A0A1B0GVM2 712 aa12□□□□□ -0.49
VARS2-208ENST00000477052 TRABD2BA6NFA1 517 aa12□□□□□ -0.49
VARS2-208ENST00000477052 TCAF2A6NFQ2 919 aa12□□□□□ -0.49
VARS2-208ENST00000477052 K7ERQ8 282 aa12□□□□□ -0.49
VARS2-208ENST00000477052 M0QYT0 321 aa12□□□□□ -0.49
VARS2-208ENST00000477052 TNFSF14O43557 240 aa12□□□□□ -0.49
VARS2-208ENST00000477052 PCDHGA12O60330 932 aa12□□□□□ -0.49
VARS2-208ENST00000477052 SNAP91O60641 907 aa12□□□□□ -0.49
VARS2-208ENST00000477052 DKK1O94907 266 aa12□□□□□ -0.49
VARS2-208ENST00000477052 ADCY5O95622 1261 aa12□□□□□ -0.49
VARS2-208ENST00000477052 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
VARS2-208ENST00000477052 ADH1BP00325 375 aa12□□□□□ -0.49
VARS2-208ENST00000477052 MT-CO1P00395 513 aa12□□□□□ -0.49
VARS2-208ENST00000477052 C5AR1P21730 350 aa12□□□□□ -0.49
VARS2-208ENST00000477052 CD38P28907 300 aa12□□□□□ -0.49
VARS2-208ENST00000477052 CCR1P32246 355 aa12□□□□□ -0.49
VARS2-208ENST00000477052 CYP4F3Q08477 520 aa12□□□□□ -0.49
VARS2-208ENST00000477052 CNTN1Q12860 1018 aa12□□□□□ -0.49
VARS2-208ENST00000477052 ELAVL3Q14576 367 aaKnown RBP12□□□□□ -0.49
VARS2-208ENST00000477052 DLG2Q15700 870 aa12□□□□□ -0.49
VARS2-208ENST00000477052 MEA1Q16626 185 aa12□□□□□ -0.49
VARS2-208ENST00000477052 COL28A1Q2UY09 1125 aa12□□□□□ -0.49
VARS2-208ENST00000477052 ALFQ53S48 1182 aa12□□□□□ -0.49
VARS2-208ENST00000477052 EFHC1Q5JVL4 640 aa12□□□□□ -0.49
VARS2-208ENST00000477052 RABGAP1LQ5R372 815 aa12□□□□□ -0.49
VARS2-208ENST00000477052 C11orf57Q6ZUT1 292 aaPredicted RBP12□□□□□ -0.49
VARS2-208ENST00000477052 SND1Q7KZF4 910 aaKnown RBP eCLIP12□□□□□ -0.49
VARS2-208ENST00000477052 SPATS2Q86XZ4 545 aaKnown RBP12□□□□□ -0.49
VARS2-208ENST00000477052 EID2Q8N6I1 236 aa12□□□□□ -0.49
VARS2-208ENST00000477052 KDM1BQ8NB78 822 aa12□□□□□ -0.49
VARS2-208ENST00000477052 FEM1AQ9BSK4 669 aa12□□□□□ -0.49
VARS2-208ENST00000477052 TRIM62Q9BVG3 475 aa12□□□□□ -0.49
VARS2-208ENST00000477052 PIGVQ9NUD9 493 aa12□□□□□ -0.49
VARS2-208ENST00000477052 FTSJ1Q9UET6 329 aa12□□□□□ -0.49
VARS2-208ENST00000477052 VPS28Q9UK41 221 aa12□□□□□ -0.49
VARS2-208ENST00000477052 FZD4Q9ULV1 537 aa12□□□□□ -0.49
VARS2-208ENST00000477052 GPSM3Q9Y4H4 160 aa12□□□□□ -0.49
VARS2-208ENST00000477052 OR51B4Q9Y5P0 310 aa12□□□□□ -0.49
VARS2-208ENST00000477052 APC2O95996 2303 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.99□□□□□ -0.49
VARS2-208ENST00000477052 C10orf142B7Z368 130 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 HSF2BPO75031 334 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 SDC3O75056 442 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 DAB1O75553 588 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 ENDOD1O94919 500 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 ITGAVP06756 1048 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 KRT9P35527 623 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 NNMTP40261 264 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 CCR5P51681 352 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 SLC6A3Q01959 620 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 PTK2Q05397 1052 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 ZNF177Q13360 481 aaPredicted RBP11.99□□□□□ -0.49
VARS2-208ENST00000477052 TPD52L1Q16890 204 aaPredicted RBP11.99□□□□□ -0.49
VARS2-208ENST00000477052 TAF3Q5VWG9 929 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 DPY19L2P1Q6NXN4 242 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 LINGO4Q6UY18 593 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 OR8D1Q8WZ84 308 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 CRELD1Q96HD1 420 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 SYNCQ9H7C4 482 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 MPP6Q9NZW5 540 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 ARHGAP20Q9P2F6 1191 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 PCDHGC3Q9UN70 934 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 ADAMTS20P59510 1910 aa11.99□□□□□ -0.49
VARS2-208ENST00000477052 GOLGA8SH3BPF8 625 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 TLR4O00206 839 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 ENC1O14682 589 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 SMAD6O43541 496 aaKnown RBP11.98□□□□□ -0.49
VARS2-208ENST00000477052 CTSLP07711 333 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 GLI1P08151 1106 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 SLC2A3P11169 496 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 PRLRP16471 622 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 ZNF18P17022 549 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 GLDCP23378 1020 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 RRM1P23921 792 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 SULT1E1P49888 294 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 PLK1P53350 603 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 NXPH1P58417 271 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms