RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ALOX15BO15296 676 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 SDC3O75056 442 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 DXOO77932 396 aaKnown RBP12.99□□□□□ -0.33
SKA3-206ENST00000475251 MOCS2O96007 188 aaPredicted RBP12.99□□□□□ -0.33
SKA3-206ENST00000475251 GP1BAP07359 652 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 MAT2AP31153 395 aaKnown RBP12.99□□□□□ -0.33
SKA3-206ENST00000475251 DUSP3P51452 185 aaPredicted RBP12.99□□□□□ -0.33
SKA3-206ENST00000475251 GABREP78334 506 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
SKA3-206ENST00000475251 CNGA2Q16280 664 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 CBWD6Q4V339 395 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 CBWD3Q5JTY5 395 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 CBWD5Q5RIA9 395 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 BEND5Q7L4P6 421 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 CHSY1Q86X52 802 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 APCDD1Q8J025 514 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 LGI2Q8N0V4 545 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
SKA3-206ENST00000475251 FAM149B1Q96BN6 582 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 SLC39A13Q96H72 371 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 HIC2Q96JB3 615 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 BTN2A3PQ96KV6 586 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 TSG101Q99816 390 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 DPH1Q9BZG8 443 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 MIS12Q9H081 205 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 ABCG4Q9H172 646 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 THSD1Q9NS62 852 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 SLC12A6Q9UHW9 1150 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 SLC25A13Q9UJS0 675 aa12.99□□□□□ -0.33
SKA3-206ENST00000475251 NEMP2A6NFY4 417 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 PIK3R2O00459 728 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 TRIM38O00635 465 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
SKA3-206ENST00000475251 RTN2O75298 545 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 THEGLP0DJG4 465 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 CKMT1AP12532 417 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 ZNF18P17022 549 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 DGKAP23743 735 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 ACADSBP45954 432 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 LSSP48449 732 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 STK19P49842 368 aaPredicted RBP12.98□□□□□ -0.33
SKA3-206ENST00000475251 ACCSLQ4AC99 568 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 RABGAP1LQ5R372 815 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 CDCP2Q5VXM1 449 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 RAP1GAP2Q684P5 730 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 NEK5Q6P3R8 708 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 PCSK4Q6UW60 755 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 SLC25A45Q8N413 288 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 UBR7Q8N806 425 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 FAM174AQ8TBP5 190 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 CLEC4CQ8WTT0 213 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
SKA3-206ENST00000475251 RNF34Q969K3 372 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 GRAMD1AQ96CP6 724 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 MYEOVQ96EZ4 313 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
SKA3-206ENST00000475251 NAF1Q96HR8 494 aaKnown RBP12.98□□□□□ -0.33
SKA3-206ENST00000475251 DUSP23Q9BVJ7 150 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 POLR1BQ9H9Y6 1135 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 KLHL11Q9NVR0 708 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 PCDHB4Q9Y5E5 795 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 PCDHB1Q9Y5F3 818 aa12.98□□□□□ -0.33
SKA3-206ENST00000475251 A0A1B0GVM2 712 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 TCAF2A6NFQ2 919 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 MCF2LO15068 1137 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 OPA1O60313 960 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 USP12O75317 370 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 MPOP05164 745 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 SLC2A3P11169 496 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 PDGFRAP16234 1089 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 TACR2P21452 398 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 PLK1P53350 603 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
SKA3-206ENST00000475251 KCNMA1Q12791 1236 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 CETN1Q12798 172 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 MTA1Q13330 715 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 ARHGAP40Q5TG30 622 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 ATP6V0D2Q8N8Y2 350 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 FRS2Q8WU20 508 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 TFAP2BQ92481 460 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 IFT43Q96FT9 208 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 SPATA32Q96LK8 384 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 CCDC114Q96M63 670 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 NT5C1BQ96P26 610 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.97□□□□□ -0.33
SKA3-206ENST00000475251 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 NLGN3Q9NZ94 848 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 NCKIPSDQ9NZQ3 722 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 ARMCX3Q9UH62 379 aaPredicted RBP12.97□□□□□ -0.33
SKA3-206ENST00000475251 NAALADL1Q9UQQ1 740 aa12.97□□□□□ -0.33
SKA3-206ENST00000475251 FAM237AA0A1B0GTK4 181 aa12.96□□□□□ -0.33
SKA3-206ENST00000475251 B8ZZF3 427 aa12.96□□□□□ -0.33
SKA3-206ENST00000475251 FFAR2O15552 330 aa12.96□□□□□ -0.33
SKA3-206ENST00000475251 KLK10O43240 276 aa12.96□□□□□ -0.33
SKA3-206ENST00000475251 ATP9BO43861 1147 aa12.96□□□□□ -0.33
SKA3-206ENST00000475251 CSO75390 466 aaKnown RBP12.96□□□□□ -0.33
SKA3-206ENST00000475251 FYNP06241 537 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms