RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 PDCL3Q9H2J4 239 aa14.51□□□□□ -0.09
UPF3A-204ENST00000475218 WDCPQ9H6R7 721 aa14.51□□□□□ -0.09
UPF3A-204ENST00000475218 SGK2Q9HBY8 427 aa14.51□□□□□ -0.09
UPF3A-204ENST00000475218 ADAMTS1Q9UHI8 967 aa14.51□□□□□ -0.09
UPF3A-204ENST00000475218 SARDHQ9UL12 918 aa14.51□□□□□ -0.09
UPF3A-204ENST00000475218 TP53BP1Q12888 1972 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-204ENST00000475218 LRRC10BA6NIK2 292 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 DRGXA6NNA5 263 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 LGALS16A8MUM7 142 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 ATP9BO43861 1147 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 CBFA2T3O75081 653 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 GJB6O95452 261 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 PSMD8P48556 350 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 DEUP1Q05D60 604 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 TTC31Q49AM3 519 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-204ENST00000475218 KIAA0895LQ68EN5 471 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 NCEH1Q6PIU2 408 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 SLC30A5Q8TAD4 765 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 SNX19Q92543 992 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 OSGEPQ9NPF4 335 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 TMEM63CQ9P1W3 806 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 STAP1Q9ULZ2 295 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 SCML1Q9UN30 329 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 CACNA1BQ00975 2339 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 RNF103O00237 685 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 PLK4O00444 970 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 WNT9AO14904 365 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 CLDN11O75508 207 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 ENDOD1O94919 500 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 FSBPO95073 299 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 MT-CO1P00395 513 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 UNGP13051 313 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-204ENST00000475218 CD27P26842 260 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 CDH4P55283 916 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 MYL5Q02045 173 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 SLC14A1Q13336 389 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 KIF19Q2TAC6 998 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 HLA-BQ31612 363 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 RNF219Q5W0B1 726 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-204ENST00000475218 ARCQ7LC44 396 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 PHLDB2Q86SQ0 1253 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 ZNF677Q86XU0 584 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 JOSD2Q8TAC2 188 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 METTL5Q9NRN9 209 aaKnown RBP14.5□□□□□ -0.09
UPF3A-204ENST00000475218 ANO10Q9NW15 660 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 MPP6Q9NZW5 540 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 SNX11Q9Y5W9 270 aa14.5□□□□□ -0.09
UPF3A-204ENST00000475218 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-204ENST00000475218 A0A0D9SEW6 157 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 K7ERQ8 282 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 SNAP91O60641 907 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 RNASEH2AO75792 299 aaKnown RBP14.49□□□□□ -0.09
UPF3A-204ENST00000475218 ATP1A3P13637 1013 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 AFF3P51826 1226 aaKnown RBP14.49□□□□□ -0.09
UPF3A-204ENST00000475218 ADPRHP54922 357 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 SIM1P81133 766 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-204ENST00000475218 SULT2A1Q06520 285 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 MTA1Q13330 715 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 ZNF177Q13360 481 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-204ENST00000475218 ELAVL3Q14576 367 aaKnown RBP14.49□□□□□ -0.09
UPF3A-204ENST00000475218 STX1AQ16623 288 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 DBX2Q6ZNG2 339 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 FAM131BQ86XD5 332 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 NAXDQ8IW45 347 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 C1orf74Q96LT6 269 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 MAGEB5Q9BZ81 275 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 SLC32A1Q9H598 525 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 GAREM1Q9H706 876 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 FZD4Q9ULV1 537 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 NEU3Q9UQ49 428 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 DOCK9Q9BZ29 2069 aa14.49□□□□□ -0.09
UPF3A-204ENST00000475218 ZFHX4Q86UP3 3567 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 IGF2RP11717 2491 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 FAM47DPA6NHR8 397 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 E9PAM4 449 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 KCNK3O14649 394 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 F9P00740 461 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 SRCP12931 536 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 C5AR1P21730 350 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 C15orf59Q2T9L4 293 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-204ENST00000475218 CCDC14Q49A88 953 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 SASS6Q6UVJ0 657 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 Q6ZVU0 165 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 SH2D3CQ8N5H7 860 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 ERGIC2Q96RQ1 377 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 VPS51Q9UID3 782 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 VPS28Q9UK41 221 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 HS3ST2Q9Y278 367 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 ANKRD6Q9Y2G4 727 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 CABIN1Q9Y6J0 2220 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 CHD5Q8TDI0 1954 aa14.48□□□□□ -0.09
UPF3A-204ENST00000475218 C2CD4BA6NLJ0 364 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 C1QTNF9BB2RNN3 333 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 SMAD6O43541 496 aaKnown RBP14.47□□□□□ -0.09
UPF3A-204ENST00000475218 RNASEH1O60930 286 aaKnown RBP14.47□□□□□ -0.09
UPF3A-204ENST00000475218 KRT37O76014 449 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 WNT1P04628 370 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 CTSLP07711 333 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 C1QTNF9P0C862 333 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 ZNF883P0CG24 379 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms