RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 SLC22A25Q6T423 547 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 LRRC8DQ7L1W4 858 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 RTL10Q7L3V2 364 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 ADGRG6Q86SQ4 1221 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 DNAJC10Q8IXB1 793 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 GALNT16Q8N428 558 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 PAQR4Q8N4S7 273 aaPredicted RBP4.49□□□□□ -1.69
SDHB-204ENST00000475049 DPF1Q92782 380 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 CUL5Q93034 780 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 RRP36Q96EU6 259 aaKnown RBP4.49□□□□□ -1.69
SDHB-204ENST00000475049 MPP4Q96JB8 637 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 CRAMP1Q96RY5 1269 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 TAOK3Q9H2K8 898 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 MOV10Q9HCE1 1003 aaKnown RBP4.49□□□□□ -1.69
SDHB-204ENST00000475049 TXNRD2Q9NNW7 524 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 ADARB2Q9NS39 739 aaKnown RBP4.49□□□□□ -1.69
SDHB-204ENST00000475049 TBX20Q9UMR3 447 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 DHDHQ9UQ10 334 aa4.49□□□□□ -1.69
SDHB-204ENST00000475049 CYP2D7A0A087X1C5 515 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 SMIM35A0A1B0GVV1 85 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 J3KRW8 73 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 HBP1O60381 514 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 UGDHO60701 494 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 CBX6O95503 412 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 HLA-DQA2P01906 255 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 EPHB2P29323 1055 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 CHRNA5P30532 468 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 CYP2J2P51589 502 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 RPP30P78346 268 aaKnown RBP4.48□□□□□ -1.69
SDHB-204ENST00000475049 ZNF91Q05481 1191 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 GALNT2Q10471 571 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 IL13RA2Q14627 380 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 EARS2Q5JPH6 523 aaKnown RBP4.48□□□□□ -1.69
SDHB-204ENST00000475049 SH2D4BQ5SQS7 431 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 MEX3CQ5U5Q3 659 aaKnown RBP4.48□□□□□ -1.69
SDHB-204ENST00000475049 ZNF793Q6ZN11 406 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 YTHDF3Q7Z739 585 aaKnown RBP4.48□□□□□ -1.69
SDHB-204ENST00000475049 NOC3LQ8WTT2 800 aaKnown RBP4.48□□□□□ -1.69
SDHB-204ENST00000475049 ST8SIA4Q92187 359 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 SH3KBP1Q96B97 665 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 IFT27Q9BW83 186 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 NPLQ9BXD5 320 aaPredicted RBP4.48□□□□□ -1.69
SDHB-204ENST00000475049 QTRT1Q9BXR0 403 aaKnown RBP4.48□□□□□ -1.69
SDHB-204ENST00000475049 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.48□□□□□ -1.69
SDHB-204ENST00000475049 SLC22A11Q9NSA0 550 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 TMEM248Q9NWD8 314 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 PTGFRNQ9P2B2 879 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 CD207Q9UJ71 328 aa4.48□□□□□ -1.69
SDHB-204ENST00000475049 TMEM247A6NEH6 219 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 KCNU1A8MYU2 1149 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 KCNJ18B7U540 433 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 RHODO00212 210 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 FCGR2AP12318 317 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 KLRC2P26717 231 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 ELF1P32519 619 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 HNF1BP35680 557 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 GGT5P36269 586 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 SKIV2L2P42285 1042 aaKnown RBP4.47□□□□□ -1.69
SDHB-204ENST00000475049 PAFAH1B1P43034 410 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 ZBTB16Q05516 673 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 PGM5Q15124 567 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 SMN1Q16637 294 aaKnown RBP4.47□□□□□ -1.69
SDHB-204ENST00000475049 FAM171A1Q5VUB5 890 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 SLC18B1Q6NT16 456 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 FAM57BQ71RH2 274 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 CCDC25Q86WR0 208 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 PRIMA1Q86XR5 153 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 GHDCQ8N2G8 530 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 TMEM217Q8N7C4 229 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 EXD3Q8N9H8 876 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 RFWD2Q8NHY2 731 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 BCAS4Q8TDM0 211 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 SEMA4CQ9C0C4 833 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 PAIP1Q9H074 479 aaKnown RBP4.47□□□□□ -1.69
SDHB-204ENST00000475049 AAMDCQ9H7C9 122 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 TTC12Q9H892 705 aaPredicted RBP4.47□□□□□ -1.69
SDHB-204ENST00000475049 JMJD4Q9H9V9 463 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 IL21RQ9HBE5 538 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 TMEM45AQ9NWC5 275 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 IRAK4Q9NWZ3 460 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 UPB1Q9UBR1 384 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 ZNF69Q9UC07 566 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 UTS2RQ9UKP6 389 aa4.47□□□□□ -1.69
SDHB-204ENST00000475049 F8W810 466 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 TSPAN4O14817 238 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 TULP3O75386 442 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 RBMXL2O75526 392 aaKnown RBP4.46□□□□□ -1.7
SDHB-204ENST00000475049 LATS1O95835 1130 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 ATP1A3P13637 1013 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 CD72P21854 359 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 ATP5F1P24539 256 aaPredicted RBP4.46□□□□□ -1.7
SDHB-204ENST00000475049 CD38P28907 300 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 DDIT3P35638 169 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 GPD2P43304 727 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 RPS13P62277 151 aaKnown RBP4.46□□□□□ -1.7
SDHB-204ENST00000475049 RHAGQ02094 409 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 SRSF4Q08170 494 aaKnown RBP4.46□□□□□ -1.7
SDHB-204ENST00000475049 PMPCAQ10713 525 aa4.46□□□□□ -1.7
SDHB-204ENST00000475049 DDX10Q13206 875 aaKnown RBP4.46□□□□□ -1.7
SDHB-204ENST00000475049 SRSF7Q16629 238 aaKnown RBP eCLIP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms