RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 TPCN2Q8NHX9 752 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 WDR36Q8NI36 951 aaKnown RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 OR8D1Q8WZ84 308 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 KLK6Q92876 244 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 ARRDC3Q96B67 414 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 USP28Q96RU2 1077 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 DNAJC28Q9NX36 388 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 ATXN7L1Q9ULK2 861 aaPredicted RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 MORC2Q9Y6X9 1032 aaPredicted RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 NYNRINQ9P2P1 1898 aaKnown RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
RTN4R-206ENST00000474642 PVALEFA0A1B0GWK0 134 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 PMS2P1A4D2B8 440 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 EFSO43281 561 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 NEBLO76041 1014 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 LUC7L3O95232 432 aaKnown RBP13.68□□□□□ -0.22
RTN4R-206ENST00000474642 IGLV3-27P01718 113 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 NR3C1P04150 777 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 PRLRP16471 622 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 PDCP20941 246 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 AKT2P31751 481 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
RTN4R-206ENST00000474642 RAD23BP54727 409 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 HNRNPKP61978 463 aaKnown RBP eCLIP13.68□□□□□ -0.22
RTN4R-206ENST00000474642 CNTN1Q12860 1018 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
RTN4R-206ENST00000474642 UBAP2LQ14157 1087 aaKnown RBP13.68□□□□□ -0.22
RTN4R-206ENST00000474642 STK38Q15208 465 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 MSANTD2Q6P1R3 559 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 EFL1Q7Z2Z2 1120 aaKnown RBP13.68□□□□□ -0.22
RTN4R-206ENST00000474642 CLEC14AQ86T13 490 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 TMEM145Q8NBT3 493 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 OR13H1Q8NG92 308 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 TATDN2Q93075 761 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 AZIN2Q96A70 460 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 FAM131CQ96AQ9 280 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 SGF29Q96ES7 293 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 MYEOVQ96EZ4 313 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 PREBQ9HCU5 417 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 CISHQ9NSE2 258 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 HESX1Q9UBX0 185 aa13.68□□□□□ -0.22
RTN4R-206ENST00000474642 FLNCQ14315 2725 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 C1QTNF3-AMACRE9PGA6 284 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 ITGB2P05107 769 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 FAM87AP0C7U9 286 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 ZNF18P17022 549 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 ITGB6P18564 788 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 NUMBP49757 651 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 BST2Q10589 180 aaKnown RBP13.67□□□□□ -0.22
RTN4R-206ENST00000474642 ACCSLQ4AC99 568 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 DCAF6Q58WW2 860 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 ZNF542PQ5EBM4 170 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 AGBL4Q5VU57 503 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 ZCCHC8Q6NZY4 707 aaKnown RBP13.67□□□□□ -0.22
RTN4R-206ENST00000474642 GUSBP11Q6P575 273 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 IFT43Q96FT9 208 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 NUCKS1Q9H1E3 243 aaKnown RBP13.67□□□□□ -0.22
RTN4R-206ENST00000474642 MAGEF1Q9HAY2 307 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 FZD3Q9NPG1 666 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 CNGB3Q9NQW8 809 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 NCKIPSDQ9NZQ3 722 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 SARDHQ9UL12 918 aa13.67□□□□□ -0.22
RTN4R-206ENST00000474642 MYO9AB2RTY4 2548 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 CCDC187A0A096LP49 1063 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 PDXKO00764 312 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 TCEA3O75764 348 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 ITGA2BP08514 1039 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 LCP1P13796 627 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 AFMP43652 599 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 DAOAP59103 153 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 NUCB2P80303 420 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 TLE1Q04724 770 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 SULT2A1Q06520 285 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 PPP3CAQ08209 521 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 MS4A13Q5J8X5 152 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 CRTC1Q6UUV9 634 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 UBA3Q8TBC4 463 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 TMEM174Q8WUU8 243 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 SEMA3CQ99985 751 aa13.66□□□□□ -0.22
RTN4R-206ENST00000474642 CREBBPQ92793 2442 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 TRPM6Q9BX84 2022 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 A0A1W2PQU0 124 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
RTN4R-206ENST00000474642 POLR2DO15514 142 aaKnown RBP13.65□□□□□ -0.22
RTN4R-206ENST00000474642 PPFIA2O75334 1257 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.22
RTN4R-206ENST00000474642 KRT13P13646 458 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 HNRNPA2B1P22626 353 aaKnown RBP13.65□□□□□ -0.22
RTN4R-206ENST00000474642 CLDN2P57739 230 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 CUL4BQ13620 913 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 PTAR1Q7Z6K3 402 aaPredicted RBP13.65□□□□□ -0.22
RTN4R-206ENST00000474642 JAMLQ86YT9 394 aa13.65□□□□□ -0.22
RTN4R-206ENST00000474642 DCP2Q8IU60 420 aaKnown RBP13.65□□□□□ -0.22
RTN4R-206ENST00000474642 LGI2Q8N0V4 545 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms