RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SLCO1A2P46721 670 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 KRT6CP48668 564 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 NPY2RP49146 381 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 ALDH7A1P49419 539 aaKnown RBP3.57□□□□□ -1.84
UBR3-208ENST00000474426 SERPINB9P50453 376 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 ARFIP2P53365 341 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 GDF10P55107 478 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 GMFBP60983 142 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 MYO1EQ12965 1108 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 PHKG1Q16816 387 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 ARHGAP44Q17R89 818 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 SMU1Q2TAY7 513 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 GPAT3Q53EU6 434 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 PXDC1Q5TGL8 231 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 ARHGEF16Q5VV41 709 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 TRILQ7L0X0 811 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 ATCAYQ86WG3 371 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 PLD4Q96BZ4 506 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 STAMBPL1Q96FJ0 436 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 APOPT1Q96IL0 206 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 CENPHQ9H3R5 247 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 SLC38A10Q9HBR0 1119 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 PALMDQ9NP74 551 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 CABP5Q9NP86 173 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 TMOD2Q9NZR1 351 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 KLHL14Q9P2G3 628 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 ITGA11Q9UKX5 1188 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 USH1CQ9Y6N9 552 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 PLEKHG1Q9ULL1 1385 aa3.57□□□□□ -1.84
UBR3-208ENST00000474426 MN1Q10571 1320 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 SYNGAP1Q96PV0 1343 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZNF644Q9H582 1327 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 hCG_2039718K7EN88 272 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 CLOCKO15516 846 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TGM5O43548 720 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SHOX2O60902 331 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 ANP32DO95626 131 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ITGAXP20702 1163 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 THPOP40225 353 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 GSTM5P46439 218 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 MECP2P51608 486 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 ITGA8P53708 1063 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ARL4CP56559 192 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 YWHAEP62258 255 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 GAD2Q05329 585 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 IFFO1Q0D2I5 559 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 FADDQ13158 208 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TMEM132BQ14DG7 1078 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 C2orf76Q3KRA6 126 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PAGE2BQ5JRK9 111 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 RNF220Q5VTB9 566 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 KRT79Q5XKE5 535 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 AFMIDQ63HM1 303 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DENND5AQ6IQ26 1287 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SZRD1Q7Z422 152 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PRPF39Q86UA1 669 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 KIF27Q86VH2 1401 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 FBXL6Q8N531 539 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 NOA1Q8NC60 698 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 ADCY4Q8NFM4 1077 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DTD1Q8TEA8 209 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SLC13A3Q8WWT9 602 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 HLA-CQ95604 372 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZNF514Q96K75 400 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 SLC6A17Q9H1V8 727 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TMEM245Q9H330 911 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 OR51B5Q9H339 312 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 COQ10BQ9H8M1 238 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 CNTD2Q9H8S5 307 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TXNDC16Q9P2K2 825 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZNF229Q9UJW7 825 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SLC13A4Q9UKG4 626 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PCDHB8Q9UN66 801 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 COL15A1P39059 1388 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 GSTTP1A0A1W2PQM5 241 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DENND3A2RUS2 1198 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 POTECB2RU33 542 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 CFAP99D6REC4 459 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 H3BM21 787 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DDX3XO00571 662 aaKnown RBP eCLIP3.56□□□□□ -1.84
UBR3-208ENST00000474426 PSIP1O75475 530 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 ONECUT2O95948 504 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 HBQ1P09105 142 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 KRT5P13647 590 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PTPN4P29074 926 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PIP4K2AP48426 406 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZNF41P51814 821 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 CCNG1P51959 295 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 NPEPPSP55786 919 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ARF5P84085 180 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TNFRSF17Q02223 184 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TROAPQ12815 778 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ABRQ12979 859 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DGKDQ16760 1214 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 FAM26FQ5R3K3 315 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ATAD3BQ5T9A4 648 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PRMT9Q6P2P2 845 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 BLOC1S2Q6QNY1 142 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TRMT10CQ7L0Y3 403 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 RRAGAQ7L523 313 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms