RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PPP1R26Q5T8A7 1209 aaPredicted RBP13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RETSATQ6NUM9 610 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TTC7BQ86TV6 843 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAM126BQ8IXS8 530 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SYT15Q9BQS2 421 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 BPIFA1Q9NP55 256 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MRPS23Q9Y3D9 190 aaKnown RBP13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 AP4S1Q9Y587 144 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CDHR2Q9BYE9 1310 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAM25EA8MYX2 175 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZNF7P17097 686 aaPredicted RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HPCAL1P37235 193 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ATP1A4Q13733 1029 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CDK5RAP1Q96SZ6 601 aaKnown RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAM192AQ9GZU8 254 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DSN1Q9H410 356 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ULK1O75385 1050 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 LCA5LO95447 670 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PON1P27169 355 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAM98BQ52LJ0 330 aaKnown RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PDCD4Q53EL6 469 aaKnown RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ADSSL1Q8N142 457 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 JSRP1Q96MG2 331 aaPredicted RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HGH1Q9BTY7 390 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SPATA9Q9BWV2 254 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TRIM39Q9HCM9 518 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MCUBQ9NWR8 336 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NYAP2Q9P242 653 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 H3BUI4 141 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 BGNP21810 368 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ITGA9Q13797 1035 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DGCR6Q14129 220 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GRB14Q14449 540 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CNSTQ6PJW8 725 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PRR36Q9H6K5 1346 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 EIF3HO15372 352 aaKnown RBP eCLIP13.45□□□□□ -0.261e-6■■■□□ 18.2
NPHP3-ACAD11-201ENST00000471702 ADORA2AP29274 412 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RASA2Q15283 850 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 EFR3BQ9Y2G0 817 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MCIDASD6RGH6 385 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TRIM38O00635 465 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZNF208O43345 1280 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RRM1P23921 792 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MTTPP55157 894 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CENPCQ03188 943 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DEFB107AQ8IZN7 70 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 C2orf73Q8N5S3 287 aaPredicted RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GPR156Q8NFN8 814 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ENKURQ8TC29 256 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TSPAN16Q9UKR8 245 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CES2O00748 559 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 VAPBO95292 243 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ALAS2P22557 587 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SPANXN2Q5MJ10 180 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 USP45Q70EL2 814 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 STK32CQ86UX6 486 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ADGRG2Q8IZP9 1017 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 C3orf20Q8ND61 904 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GLIS2Q9BZE0 524 aaPredicted RBP13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TAS2R13Q9NYV9 303 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 INVSQ9Y283 1065 aa13.45□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MYBL2P10244 700 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 LGALS3BPQ08380 585 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SMCO1Q147U7 214 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZNHIT3Q15649 155 aaPredicted RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZNF470Q6ECI4 717 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 IKBIPQ70UQ0 350 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RMND5BQ96G75 393 aaPredicted RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DUSP10Q9Y6W6 482 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CCT8L1PA6NM43 557 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAM86B1E9PN63 330 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RBP1P09455 135 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CAP2P40123 477 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 IKBKEQ14164 716 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NRSN1Q8IZ57 195 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ANKS1AQ92625 1134 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MIEF2Q96C03 454 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 A0A088AWK7 358 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZNF10P21506 573 aaPredicted RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 AP1S3Q96PC3 154 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ADAM2Q99965 735 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PCDH12Q9NPG4 1184 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KPNA5O15131 536 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MGAT1P26572 445 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MECP2P51608 486 aaKnown RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PDK2Q15119 407 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MTDHQ86UE4 582 aaKnown RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GPSM1Q86YR5 675 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms