RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PRAMEF12O95522 483 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 ACSL3O95573 720 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 JCHAINP01591 159 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 CKMP06732 381 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 MX2P20592 715 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 HOXA9P31269 272 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 NRIP1P48552 1158 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 CAV1Q03135 178 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 SEMA5AQ13591 1074 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 CBX2Q14781 532 aaPredicted RBP8.52□□□□□ -1.04
GTF3A-206ENST00000470606 TEX44Q53QW1 395 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 FSCBQ5H9T9 825 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 LEKR1Q6ZMV7 388 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 OTOP3Q7RTS5 596 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 HOOK3Q86VS8 718 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 BBS7Q8IWZ6 715 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 FAM217AQ8IXS0 508 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 BBOF1Q8ND07 529 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 TTC16Q8NEE8 873 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 WFDC5Q8TCV5 224 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 USP33Q8TEY7 942 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 MRPS31Q92665 395 aaKnown RBP8.52□□□□□ -1.04
GTF3A-206ENST00000470606 OXNAD1Q96HP4 312 aaPredicted RBP8.52□□□□□ -1.04
GTF3A-206ENST00000470606 SAMD11Q96NU1 681 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 AGAP3Q96P47 875 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 SERPINB12Q96P63 405 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 MLPHQ9BV36 600 aaPredicted RBP8.52□□□□□ -1.04
GTF3A-206ENST00000470606 PIH1D1Q9NWS0 290 aaKnown RBP8.52□□□□□ -1.04
GTF3A-206ENST00000470606 IPO11Q9UI26 975 aaKnown RBP8.52□□□□□ -1.04
GTF3A-206ENST00000470606 CLEC4EQ9ULY5 219 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 CLUHO75153 1309 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 F5H5T6 163 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 ALOX15BO15296 676 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 CHADO15335 359 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 OPHN1O60890 802 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 GJB3O75712 270 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 PIAS1O75925 651 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 TTC4O95801 387 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 GLP2RO95838 553 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 C1RP00736 705 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 CCNB1P14635 433 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 PTPN2P17706 415 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 GLDCP23378 1020 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 CCNCP24863 283 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 HOXD9P28356 352 aaPredicted RBP8.52□□□□□ -1.05
GTF3A-206ENST00000470606 CDC25CP30307 473 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 OR1E1P30953 314 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 MAGEA3P43357 314 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 MAGEA4P43358 317 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 SLC11A2P49281 568 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 NDST2P52849 883 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 GPX6P59796 221 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 SLC10A7Q0GE19 358 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 SPARCL1Q14515 664 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 HIF1AQ16665 826 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 DUSP6Q16828 381 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 TTMPQ5BVD1 217 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 CFAP58Q5T655 872 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 GPR158Q5T848 1215 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 KCTD11Q693B1 232 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 CXorf57Q6NSI4 855 aaKnown RBP8.52□□□□□ -1.05
GTF3A-206ENST00000470606 LRRC31Q6UY01 552 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 PDZD4Q76G19 769 aaPredicted RBP8.52□□□□□ -1.05
GTF3A-206ENST00000470606 PID1Q7Z2X4 250 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 MPP5Q8N3R9 675 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.52□□□□□ -1.05
GTF3A-206ENST00000470606 LZTR1Q8N653 840 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 PDCD7Q8N8D1 485 aaKnown RBP8.52□□□□□ -1.05
GTF3A-206ENST00000470606 ITFG1Q8TB96 612 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 ING5Q8WYH8 240 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 USP13Q92995 863 aaPredicted RBP8.52□□□□□ -1.05
GTF3A-206ENST00000470606 TEKT5Q96M29 485 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 LRRC3BQ96PB8 259 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 IL12RB2Q99665 862 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 PRKD2Q9BZL6 878 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 TLE6Q9H808 572 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 SAYSD1Q9NPB0 183 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 TMEM51Q9NW97 253 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 CFAP97Q9P2B7 532 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 ANKRD36A6QL64 1941 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 MIA3Q5JRA6 1907 aa8.52□□□□□ -1.05
GTF3A-206ENST00000470606 TTC24A2A3L6 582 aaPredicted RBP8.51□□□□□ -1.05
GTF3A-206ENST00000470606 LEFTY2O00292 366 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 MUSKO15146 869 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 MATN3O15232 486 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 LINC01565O15544 149 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 CACNG3O60359 315 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 PAPLNO95428 1278 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 HLA-DQB2P05538 268 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 HNRNPA1P09651 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
GTF3A-206ENST00000470606 NUDT17P0C025 328 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 CEBPBP17676 345 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 NFKB1P19838 968 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 IFI35P80217 286 aaPredicted RBP8.51□□□□□ -1.05
GTF3A-206ENST00000470606 PDIA2Q13087 525 aaKnown RBP8.51□□□□□ -1.05
GTF3A-206ENST00000470606 CBLBQ13191 982 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 SERINC3Q13530 473 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 SLMAPQ14BN4 828 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 ALS2CLQ60I27 953 aa8.51□□□□□ -1.05
GTF3A-206ENST00000470606 PDE12Q6L8Q7 609 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms