RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 FBXL20Q96IG2 436 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 FBXL18Q96ME1 805 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 NPLQ9BXD5 320 aaPredicted RBP9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 ILKAPQ9H0C8 392 aaPredicted RBP9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 EHD1Q9H4M9 534 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 SMOXQ9NWM0 555 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 POLLQ9UGP5 575 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 ERGIC3Q9Y282 383 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 ZNF541Q9H0D2 1346 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 KPNA4O00629 521 aaPredicted RBP9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 TRIM38O00635 465 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 ACOT8O14734 319 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 NRP1O14786 923 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 SULT1C4O75897 302 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 LTFP02788 710 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 CCNA2P20248 432 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 GABRB3P28472 473 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 PSME3P61289 254 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 DLG2Q15700 870 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 PITRM1Q5JRX3 1037 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 BTLAQ7Z6A9 289 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 CERS5Q8N5B7 392 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 WDTC1Q8N5D0 677 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 SIGLEC10Q96LC7 697 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 EFHD1Q9BUP0 239 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 SOX17Q9H6I2 414 aaPredicted RBP9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 CAB39LQ9H9S4 337 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 PCDH12Q9NPG4 1184 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 PI4KBQ9UBF8 816 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 NXF1Q9UBU9 619 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 POU2F3Q9UKI9 436 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 CNOT6Q9ULM6 557 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 PCDHA11Q9Y5I1 949 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 NOX1Q9Y5S8 564 aa9.72□□□□□ -0.85
NHLRC3-203ENST00000470258 E7ENX8 843 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 EXTL3O43909 919 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 ERBB2P04626 1255 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 HDCP19113 662 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 ATP2B4P23634 1241 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 POLR2BP30876 1174 aaKnown RBP9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 GSSP48637 474 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 CREB5Q02930 508 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 DNASE1L3Q13609 305 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 TFDP2Q14188 446 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 PLCL1Q15111 1095 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 SF3B4Q15427 424 aaKnown RBP eCLIP9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 MAPK11Q15759 364 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 BCL2A1Q16548 175 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 C15orf39Q6ZRI6 1047 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 CXorf38Q8TB03 319 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 TANKQ92844 425 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 ANKRD60Q9BZ19 345 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 SDCBP2Q9H190 292 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 GBA3Q9H227 469 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 ST6GALNAC4Q9H4F1 302 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 CISHQ9NSE2 258 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 WARS2Q9UGM6 360 aaKnown RBP9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 HES2Q9Y543 173 aa9.71□□□□□ -0.85
NHLRC3-203ENST00000470258 SOBPA7XYQ1 873 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 PIGNO95427 931 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 JUNP05412 331 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 GLDCP23378 1020 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 GLRBP48167 497 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 NKX2-5P52952 324 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 PGGT1BP53609 377 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 TPTEP56180 551 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 IRF9Q00978 393 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 NFATC3Q12968 1075 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 MTMR1Q13613 665 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 C15orf59Q2T9L4 293 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 GLRA4Q5JXX5 417 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 FAM102AQ5T9C2 384 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 TMEM179Q6ZVK1 233 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 NAT16Q8N8M0 369 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 Q8N9G6 341 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 NETO2Q8NC67 525 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 TNIP2Q8NFZ5 429 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CAPSLQ8WWF8 208 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CEP41Q9BYV8 373 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 UNKQ9C0B0 810 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 AP4E1Q9UPM8 1137 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CDYLQ9Y232 598 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 TCRBV5S1A1TA0A578 114 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 IQCA1LA6NCM1 817 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CLOCKO15516 846 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 GRM5P41594 1212 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 GRIA3P42263 894 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 TRIM25Q14258 630 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 RSBN1LQ6PCB5 846 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CCNYL1Q8N7R7 359 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 NIPA2Q8N8Q9 360 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 ACDQ96AP0 544 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 SCYL1Q96KG9 808 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CNDP1Q96KN2 507 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 PEBP4Q96S96 227 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms