RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 USP3Q9Y6I4 520 aa8.49□□□□□ -1.05
LSM2-210ENST00000470086 ATP8B3O60423 1300 aa8.49□□□□□ -1.05
LSM2-210ENST00000470086 MED13LQ71F56 2210 aa8.49□□□□□ -1.05
LSM2-210ENST00000470086 ARHGEF17Q96PE2 2063 aaPredicted RBP8.49□□□□□ -1.05
LSM2-210ENST00000470086 DOCK4Q8N1I0 1966 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3DA0A087WVF3 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3IA0A087WXS9 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3EA0A087X179 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3KA0A087X1G2 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 CCDC187A0A096LP49 1063 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3FA6NER0 549 aaPredicted RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3LB9A6J9 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 MUSKO15146 869 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TGFB1I1O43294 461 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 CLDN1O95832 211 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 LDHAP00338 332 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3HP0C7X1 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 FAM200BP0CF97 657 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 LIPCP11150 499 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 GOT1P17174 413 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 GRNP28799 593 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 CHKAP35790 457 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 MLLT10P55197 1068 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 CYP24A1Q07973 514 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 KCNAB2Q13303 367 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 GNL2Q13823 731 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 DUOXA2Q1HG44 320 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3GQ6DHY5 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3CQ6IPX1 549 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 SND1Q7KZF4 910 aaKnown RBP eCLIP8.48□□□□□ -1.05
LSM2-210ENST00000470086 RSRC2Q7L4I2 434 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 TMPRSS9Q7Z410 1059 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 JAMLQ86YT9 394 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TICAM1Q8IUC6 712 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 SLC35F3Q8IY50 421 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 TBC1D3Q8IZP1 549 aaPredicted RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 WDR36Q8NI36 951 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 GOLGA1Q92805 767 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 CCDC127Q96BQ5 260 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 CCDC97Q96F63 343 aaPredicted RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 EPSTI1Q96J88 318 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 RPL10LQ96L21 214 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 SLC12A9Q9BXP2 914 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 SYNDIG1Q9H7V2 258 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 EPB41L5Q9HCM4 733 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 MARCH2Q9P0N8 246 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 SEPT3Q9UH03 358 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 SFMBT1Q9UHJ3 866 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 ACSL6Q9UKU0 697 aa8.48□□□□□ -1.05
LSM2-210ENST00000470086 ZFR2Q9UPR6 939 aaKnown RBP8.48□□□□□ -1.05
LSM2-210ENST00000470086 FBN3Q75N90 2809 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 EME2A4GXA9 379 aaPredicted RBP8.47□□□□□ -1.05
LSM2-210ENST00000470086 C9orf172C9J069 976 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 NTN3O00634 580 aaPredicted RBP8.47□□□□□ -1.05
LSM2-210ENST00000470086 PLD2O14939 933 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 CLIC2O15247 247 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 RAD51BO15315 384 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 SPINT1O43278 529 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 EPB41L2O43491 1005 aaKnown RBP8.47□□□□□ -1.05
LSM2-210ENST00000470086 TBL1XO60907 577 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 CYBBP04839 570 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 CD97P48960 835 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 CNTN1Q12860 1018 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 FGL2Q14314 439 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 FZD2Q14332 565 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 PSMD6Q15008 389 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 SNRNP35Q16560 246 aaKnown RBP8.47□□□□□ -1.05
LSM2-210ENST00000470086 ZNF699Q32M78 642 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 MPPE1Q53F39 396 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 SGO2Q562F6 1265 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 IQCHQ86VS3 1027 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 TRIM69Q86WT6 500 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 DTX1Q86Y01 620 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 SFTPA2Q8IWL1 248 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 APCDD1Q8J025 514 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 ARL14Q8N4G2 192 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 TTC17Q96AE7 1141 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 SKA1Q96BD8 255 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 CCDC3Q9BQI4 270 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 OLFML3Q9NRN5 406 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 KLHL11Q9NVR0 708 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 CLIC5Q9NZA1 410 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 PISDQ9UG56 409 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 STOML2Q9UJZ1 356 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 SCML1Q9UN30 329 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 PLA2G4CQ9UP65 541 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 ERVW-1Q9UQF0 538 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 PCDHA5Q9Y5H7 936 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 DCHS2Q6V1P9 2916 aa8.47□□□□□ -1.05
LSM2-210ENST00000470086 A0A1W2PQM1 296 aa8.46□□□□□ -1.06
LSM2-210ENST00000470086 POM121BA6NF01 834 aa8.46□□□□□ -1.06
LSM2-210ENST00000470086 ZNF233A6NK53 670 aa8.46□□□□□ -1.06
LSM2-210ENST00000470086 LRRIQ3A6PVS8 624 aaPredicted RBP8.46□□□□□ -1.06
LSM2-210ENST00000470086 SCAMP1O15126 338 aa8.46□□□□□ -1.06
LSM2-210ENST00000470086 SLC31A1O15431 190 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms