RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 SLC28A3Q9HAS3 691 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PRM3Q9NNZ6 103 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MTMR10Q9NXD2 777 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FNIP2Q9P278 1114 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 CFAP97Q9P2B7 532 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 HSFX1Q9UBD0 423 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 UBA2Q9UBT2 640 aaPredicted RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SEPT3Q9UH03 358 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC24A2Q9UI40 661 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MRPS23Q9Y3D9 190 aaKnown RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MFHAS1Q9Y4C4 1052 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RPS6KL1Q9Y6S9 549 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GOLGA6L7A0A1B0GV03 622 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 A0A1B0GVM2 712 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TCAF2A6NFQ2 919 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 ZNF197O14709 1029 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TRDMT1O14717 391 aaKnown RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 DCLK1O15075 740 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PFDN6O15212 129 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TBC1D4O60343 1298 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 USP12O75317 370 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TMEM63AO94886 807 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SHBGP04278 402 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 IL4RP24394 825 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 CCNCP24863 283 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PTPN3P26045 913 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MGAT1P26572 445 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 NNMTP40261 264 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 NUMBP49757 651 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SERPINB9P50453 376 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PAPOLAP51003 745 aaKnown RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 NDST2P52849 883 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 IL9RQ01113 521 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 CDH17Q12864 832 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GPM6BQ13491 265 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SPARCL1Q14515 664 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SMAD1Q15797 465 aaKnown RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MS4A13Q5J8X5 152 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TMEM240Q5SV17 173 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GPR158Q5T848 1215 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TMCO4Q5TGY1 634 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RASIP1Q5U651 963 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RETSATQ6NUM9 610 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FBXL22Q6P050 247 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RSPO2Q6UXX9 243 aaPredicted RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MFN1Q8IWA4 741 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 ZNF567Q8N184 647 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC25A41Q8N5S1 370 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GSDMBQ8TAX9 411 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RMDN1Q96DB5 314 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PGM2Q96G03 612 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TTLL2Q9BWV7 592 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TRABDQ9H4I3 376 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GLOD4Q9HC38 313 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GKN1Q9NS71 199 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 ARHGEF38Q9NXL2 777 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 CCDC78A2IDD5 438 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ZBTB24O43167 697 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 COCHO43405 550 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TBL1XO60907 577 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SEC24AO95486 1093 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 METTL18O95568 372 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RB1P06400 928 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SERPINF2P08697 491 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 GSTA2P09210 222 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MLNP12872 115 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PTPN2P17706 415 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ATF6P18850 670 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SAT1P21673 171 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 XPAP23025 273 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 IVDP26440 423 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ECHS1P30084 290 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PRAMEP78395 509 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CYP4F8P98187 520 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 UBE3AQ05086 875 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RAD51Q06609 339 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SEMA5AQ13591 1074 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 LAMB3Q13751 1172 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ADGRF1Q5T601 910 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ZNF697Q5TEC3 545 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TTC39BQ5VTQ0 682 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 OTUD1Q5VV17 481 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TXNDC8Q6A555 127 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CYP4V2Q6ZWL3 525 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 C16orf59Q7L2K0 433 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 C14orf80Q86SX3 495 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RBM23Q86U06 439 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CIR1Q86X95 450 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 GPR65Q8IYL9 337 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 NAT8LQ8N9F0 302 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TDRD5Q8NAT2 981 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 LEMD2Q8NC56 503 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 OR6P1Q8NGX9 317 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SMG7Q92540 1137 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 C1orf74Q96LT6 269 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SAMD11Q96NU1 681 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TGS1Q96RS0 853 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PAFAH2Q99487 392 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 C2orf49Q9BVC5 232 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PHACTR1Q9C0D0 580 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms