RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NTAN1Q96AB6 310 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 FAF2Q96CS3 445 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 SNF8Q96H20 258 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PIDD1Q9HB75 910 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 AAASQ9NRG9 546 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 GRHL1Q9NZI5 618 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 MTRF1LQ9UGC7 380 aaKnown RBP10.64□□□□□ -0.71
HERC4-207ENST00000460168 FBXW11Q9UKB1 542 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PCDHB12Q9Y5F1 795 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 VNN2O95498 520 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 HAPLN1P10915 354 aaPredicted RBP10.64□□□□□ -0.71
HERC4-207ENST00000460168 DNAJB2P25686 324 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PSMA3P25788 255 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PGFP49763 221 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 TBX4P57082 545 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 MXRA7P84157 204 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 DSG1Q02413 1049 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 NOMO1Q15155 1222 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 GKAP1Q5VSY0 366 aaPredicted RBP10.64□□□□□ -0.71
HERC4-207ENST00000460168 SLC9A4Q6AI14 798 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 ARHGEF18Q6ZSZ5 1173 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 CEP128Q6ZU80 1094 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 SCD5Q86SK9 330 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 FAM20CQ8IXL6 584 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 SDCCAG3Q96C92 435 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 TKTL2Q9H0I9 626 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 NMUR1Q9HB89 426 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 ZDHHC18Q9NUE0 388 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 RCOR3Q9P2K3 495 aaPredicted RBP10.64□□□□□ -0.71
HERC4-207ENST00000460168 NUDT5Q9UKK9 219 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PTPRSQ13332 1948 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 C2orf81A6NN90 581 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 H3BRJ5 948 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 H7C0C1 242 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 IRAK2O43187 625 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 MAP3K6O95382 1288 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 ATP5OP48047 213 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 CXCR3P49682 368 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 PDE1BQ01064 536 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 BNIP1Q12981 228 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 PSRC1Q6PGN9 363 aaPredicted RBP10.63□□□□□ -0.71
HERC4-207ENST00000460168 DARS2Q6PI48 645 aaKnown RBP10.63□□□□□ -0.71
HERC4-207ENST00000460168 C3orf62Q6ZUJ4 267 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 TAOK1Q7L7X3 1001 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 DGLUCYQ7Z3D6 616 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 DDX53Q86TM3 631 aaKnown RBP10.63□□□□□ -0.71
HERC4-207ENST00000460168 PRUNE1Q86TP1 453 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 GOLM1Q8NBJ4 401 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 ZNF461Q8TAF7 563 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 BCAS4Q8TDM0 211 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 SPATA17Q96L03 361 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 PSKH2Q96QS6 385 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 CLSTN3Q9BQT9 956 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 OSBPL1AQ9BXW6 950 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 SMOC2Q9H3U7 446 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 C10orf88Q9H8K7 445 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 VIPAS39Q9H9C1 493 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 TLR8Q9NR97 1041 aaKnown RBP10.63□□□□□ -0.71
HERC4-207ENST00000460168 GMIPQ9P107 970 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 WHRNQ9P202 907 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 HPCAL4Q9UM19 191 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 MAGED2Q9UNF1 606 aaPredicted RBP10.63□□□□□ -0.71
HERC4-207ENST00000460168 NEU2Q9Y3R4 380 aa10.63□□□□□ -0.71
HERC4-207ENST00000460168 DPPA5A6NC42 116 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 EEF2KO00418 725 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 EIF3HO15372 352 aaKnown RBP eCLIP10.62□□□□□ -0.71
HERC4-207ENST00000460168 MSI1O43347 362 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 HNRNPCP07910 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
HERC4-207ENST00000460168 ETS1P14921 441 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 SYN1P17600 705 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ITIH2P19823 946 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 AMPD1P23109 780 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 KLRC2P26717 231 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ATP5DP30049 168 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 POLD2P49005 469 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 MRPS35P82673 323 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 DHX9Q08211 1270 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 SCAPQ12770 1279 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 TAF10Q12962 218 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 MTMR3Q13615 1198 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 TAF11Q15544 211 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 P3H1Q32P28 736 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 BBS9Q3SYG4 887 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ZDHHC24Q6UX98 284 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 TRIML2Q8N7C3 387 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 GLIS1Q8NBF1 620 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 CASP10Q92851 521 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ART4Q93070 314 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 SKA1Q96BD8 255 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 HERC2P3Q9BVR0 1158 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 FAM129AQ9BZQ8 928 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 VCX3AQ9NNX9 186 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ARHGEF4Q9NR80 690 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 OSER1Q9NX31 292 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 CXXC1Q9P0U4 656 aaPredicted RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 AFF4Q9UHB7 1163 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 ZNF180Q9UJW8 692 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 L3MBTL1Q9Y468 752 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 INSL6Q9Y581 213 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms