RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 NELFEP18615 380 aaKnown RBP19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 DEUP1Q05D60 604 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 TLR1Q15399 786 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 ARMC3Q5W041 872 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 RPS27LQ71UM5 84 aaKnown RBP19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 C11orf84Q9BUA3 381 aaPredicted RBP19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 TIMM13Q9Y5L4 95 aaPredicted RBP19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 C15orf38-AP3S2A0A0A6YYH1 394 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 FZD9O00144 591 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 ERCC2P18074 760 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 PIK3R1P27986 724 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 PMLP29590 882 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 MATKP42679 507 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 LSM12Q3MHD2 195 aaKnown RBP19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 C9orf57Q5W0N0 161 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 AAGABQ6PD74 315 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 ARPINQ7Z6K5 226 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 MED10Q9BTT4 135 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 GPRC5DQ9NZD1 345 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 BFARQ9NZS9 450 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 SORCS3Q9UPU3 1222 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 PCDHB12Q9Y5F1 795 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 MT-CO1P00395 513 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 NMBRP28336 390 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 SPRP35270 261 aaPredicted RBP19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 HARS2P49590 506 aaKnown RBP19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 MAP3K7CLP57077 242 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 GRM3Q14832 879 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 EPGNQ6UW88 154 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 NPWQ8N729 165 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 KCTD4Q8WVF5 259 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 EDEM1Q92611 657 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 CENPIQ92674 756 aaPredicted RBP19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 CDY2AQ9Y6F7 541 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 CDY1Q9Y6F8 540 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 I6L893 689 aaPredicted RBP19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 PTPN3P26045 913 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 GRIA4P48058 902 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 SERPINB8P50452 374 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 FLOT2Q14254 428 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 ARL13AQ5H913 290 aaPredicted RBP19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZNF484Q5JVG2 852 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 FBXO47Q5MNV8 452 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 OTUD1Q5VV17 481 aaPredicted RBP19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZNF280DQ6N043 979 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 KCNMB4Q86W47 210 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 BEST2Q8NFU1 509 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 NPAS2Q99743 824 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 CPNE1Q99829 537 aa19.97■□□□□ 0.79
CNEP1R1-203ENST00000458059 TRIM13O60858 407 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 HOXA11P31270 313 aaPredicted RBP19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 SLC26A2P50443 739 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 MPP3Q13368 585 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 PDK1Q15118 436 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 GRIK4Q16099 956 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 CNGA3Q16281 694 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 ANKRD20A4Q4UJ75 823 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 C4orf22Q6V702 233 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 DCUN1D1Q96GG9 259 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 VPS39Q96JC1 886 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 SUDS3Q9H7L9 328 aaPredicted RBP19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 LRRC4Q9HBW1 653 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 KPNA7A9QM74 516 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 NFKB1P19838 968 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 SOX4Q06945 474 aaPredicted RBP19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZBTB17Q13105 803 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 FAM187BQ17R55 369 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 FSCBQ5H9T9 825 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 TMC7Q7Z402 723 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 DSELQ8IZU8 1212 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 GORASP1Q9BQQ3 440 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 ATXN3LQ9H3M9 355 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 ETAA1Q9NY74 926 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZDHHC2Q9UIJ5 367 aa19.96■□□□□ 0.79
CNEP1R1-203ENST00000458059 hCG_2014768A0A024R1R8 64 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 NRP1O14786 923 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 MLNP12872 115 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 GRM5P41594 1212 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 LIMK2P53671 638 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 MTTPP55157 894 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 MS4A2Q01362 244 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 CTBP1Q13363 440 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 C6orf52Q5T4I8 152 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 GRTP1Q5TC63 336 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 OTOP3Q7RTS5 596 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 BHLHE22Q8NFJ8 381 aaPredicted RBP19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 ACE2Q9BYF1 805 aaPredicted RBP19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 UBE2OQ9C0C9 1292 aaKnown RBP19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 GRIP2Q9C0E4 1043 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 FAM192AQ9GZU8 254 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 LRRC40Q9H9A6 602 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 UBAP1Q9NZ09 502 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 PEX1O43933 1283 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 RTN3O95197 1032 aaPredicted RBP19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 SETSIPP0DME0 302 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 USP10Q14694 798 aaKnown RBP19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 SLC25A52Q3SY17 297 aa19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 NOL9Q5SY16 702 aaKnown RBP19.95■□□□□ 0.78
CNEP1R1-203ENST00000458059 OSTM1Q86WC4 334 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms