RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ZCCHC7Q8N3Z6 543 aaKnown RBP19.97■□□□□ 0.79
SNX27-204ENST00000458013 ZFP14Q9HCL3 533 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 IL17RBQ9NRM6 502 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 TMPRSS4Q9NRS4 437 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 CATSPERZQ9NTU4 200 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 ADPRHL2Q9NX46 363 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 OGDHLQ9ULD0 1010 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 PCDHB12Q9Y5F1 795 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 H3BRB1 525 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 DDX3XO00571 662 aaKnown RBP eCLIP19.97■□□□□ 0.799e-14■■■■□ 25.7
SNX27-204ENST00000458013 SASH3O75995 380 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 OR56A5P0C7T3 313 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 HLA-DQA1Q5Y7H0 255 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 GTF3C2Q8WUA4 911 aaPredicted RBP19.97■□□□□ 0.79
SNX27-204ENST00000458013 CAVIN3Q969G5 261 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 TUT1Q9H6E5 874 aaKnown RBP19.97■□□□□ 0.79
SNX27-204ENST00000458013 DNAJC18Q9H819 358 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 L1RE1Q9UN81 338 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 TTMPQ5BVD1 217 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 GPSM1Q86YR5 675 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 LDLRP01130 860 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 EPHX2P34913 555 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 C21orf59P57076 290 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 RAPSNQ13702 412 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 GPR156Q8NFN8 814 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 ZNF671Q8TAW3 534 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 SMARCD1Q96GM5 515 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 ARL15Q9NXU5 204 aa19.97■□□□□ 0.79
SNX27-204ENST00000458013 SLITRK3O94933 977 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 KRT6AP02538 564 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 KRT6BP04259 564 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 ADCYAP1R1P41586 468 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 KRT6CP48668 564 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 CNTN2Q02246 1040 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 LPIN1Q14693 890 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 CRY1Q16526 586 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 RAP1GAP2Q684P5 730 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 FAM20CQ8IXL6 584 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 RORBQ92753 470 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 RHOBTB2Q9BYZ6 727 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 THAP1Q9NVV9 213 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 RBAK-RBAKDNI3L0D1 243 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 GAS2O43903 313 aaKnown RBP19.96■□□□□ 0.79
SNX27-204ENST00000458013 FKBP6O75344 327 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 LSM8O95777 96 aaKnown RBP19.96■□□□□ 0.79
SNX27-204ENST00000458013 FGRP09769 529 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PIRTP0C851 137 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 DPYSL3Q14195 570 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 BDH2Q9BUT1 245 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 ZNF518BQ9C0D4 1074 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 WDR41Q9HAD4 459 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PXDNLA1KZ92 1463 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PEX11AO75192 247 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 LRATO95237 230 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 KCNH1O95259 989 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PIGNO95427 931 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 CYP4B1P13584 511 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 GALNT3Q14435 633 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PLA2G4EQ3MJ16 856 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 SETMARQ53H47 684 aaPredicted RBP19.96■□□□□ 0.79
SNX27-204ENST00000458013 XRRA1Q6P2D8 792 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 TERB1Q8NA31 727 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 KLHL28Q9NXS3 571 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 HPSEQ9Y251 543 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 TMEM191CA6NGB0 347 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 SLCO1B7G3V0H7 640 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 OPLAHO14841 1288 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 FCGR1AP12314 374 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PIK3R1P27986 724 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PFKPQ01813 784 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 CAPSLQ8WWF8 208 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 KAT5Q92993 513 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 MYOCQ99972 504 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 ETNK2Q9NVF9 386 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 MAT2BQ9NZL9 334 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 VTI1BQ9UEU0 232 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 GPSM3Q9Y4H4 160 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 SLC25A24Q6NUK1 477 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 CD302Q8IX05 232 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 CLYBLQ8N0X4 340 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 DNAJB14Q8TBM8 379 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 ELMO1Q92556 727 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 NMRAL1Q9HBL8 299 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 LRRC4BQ9NT99 713 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 PRKAB1Q9Y478 270 aa19.96■□□□□ 0.79
SNX27-204ENST00000458013 EML1O00423 815 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 PABPC1P11940 636 aaKnown RBP19.95■□□□□ 0.78
SNX27-204ENST00000458013 BCL2L1Q07817 233 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 TGM3Q08188 693 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 PRKAA1Q13131 559 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 TSC22D1Q15714 1073 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 TMPRSS6Q8IU80 811 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 GINS4Q9BRT9 223 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 HES2Q9Y543 173 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 MADDQ8WXG6 1647 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 CLTCQ00610 1675 aaKnown RBP19.95■□□□□ 0.78
SNX27-204ENST00000458013 RAD23AP54725 363 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 PACS2Q86VP3 889 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 PNMA5Q96PV4 448 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 MYRFQ9Y2G1 1151 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms