RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 FGF10O15520 208 aaPredicted RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 RHOXF2BP0C7M4 288 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 MZF1P28698 734 aaPredicted RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 OR1E1P30953 314 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 HTR7P34969 479 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 PAPOLAP51003 745 aaKnown RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 ZNF135P52742 658 aaPredicted RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 CDH4P55283 916 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 BYSLQ13895 437 aaKnown RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 TRIP13Q15645 432 aaPredicted RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 ERCC6LQ2NKX8 1250 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 TUSC1Q2TAM9 212 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 GAB4Q2WGN9 574 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 RNF43Q68DV7 783 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 UMODL1-AS1Q8N2C9 162 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 CARNMT1Q8N4J0 409 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 TTC8Q8TAM2 541 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 DDI1Q8WTU0 396 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 IRF7Q92985 503 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 NKD2Q969F2 451 aaPredicted RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 FAM83CQ9BQN1 747 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 RHOXF2Q9BQY4 288 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 CEP41Q9BYV8 373 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 EBF3Q9H4W6 596 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 ZFP14Q9HCL3 533 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 HPS4Q9NQG7 708 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 SPHK2Q9NRA0 654 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 DUS2Q9NX74 493 aaKnown RBP11.26□□□□□ -0.61
SCN9A-205ENST00000454569 ZMYM5Q9UJ78 669 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 ZNF510Q9Y2H8 683 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 NEU2Q9Y3R4 380 aa11.26□□□□□ -0.61
SCN9A-205ENST00000454569 ANTXRLA6NF34 631 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 RASA4BC9J798 803 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 NEDD8-MDP1E9PL57 170 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 H7C0C1 242 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 J3KR12 359 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 DFFAO00273 331 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 RASA4O43374 803 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 MAFKO60675 156 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 CYP17A1P05093 508 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 ZFXP17010 805 aaPredicted RBP11.25□□□□□ -0.61
SCN9A-205ENST00000454569 CHRNA3P32297 505 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 CD70P32970 193 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 ATP5OP48047 213 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 GALNT2Q10471 571 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 PRKD1Q15139 912 aaPredicted RBP11.25□□□□□ -0.61
SCN9A-205ENST00000454569 DHCR24Q15392 516 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 RABGAP1LQ5R372 815 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 DRICH1Q6PGQ1 229 aaPredicted RBP11.25□□□□□ -0.61
SCN9A-205ENST00000454569 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
SCN9A-205ENST00000454569 C12orf40Q86WS4 652 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 APCDD1Q8J025 514 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 NAT16Q8N8M0 369 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 OSCP1Q8WVF1 389 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 MAIP1Q8WWC4 291 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 ARHGEF2Q92974 986 aaKnown RBP11.25□□□□□ -0.61
SCN9A-205ENST00000454569 HLA-CQ95604 372 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 CHFRQ96EP1 664 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 ALG14Q96F25 216 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 POM121Q96HA1 1249 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 LMLNQ96KR4 655 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 ANKZF1Q9H8Y5 726 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 KIF9Q9HAQ2 790 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 PCYOX1Q9UHG3 505 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 INTS6Q9UL03 887 aaKnown RBP11.25□□□□□ -0.61
SCN9A-205ENST00000454569 ZNF148Q9UQR1 794 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 DRG1Q9Y295 367 aaKnown RBP11.25□□□□□ -0.61
SCN9A-205ENST00000454569 TBC1D30Q9Y2I9 924 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 OR51B4Q9Y5P0 310 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 NUMBLQ9Y6R0 609 aa11.25□□□□□ -0.61
SCN9A-205ENST00000454569 A0A1B0GVM2 712 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 TCAF2A6NFQ2 919 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 DYNC1I1O14576 645 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CLDN11O75508 207 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 LUC7L3O95232 432 aaKnown RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 PEX11BO96011 259 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 PENKP01210 267 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 IL9P15248 144 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CHKAP35790 457 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 SLC6A11P48066 632 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 NR2C2P49116 596 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 FCHO2Q0JRZ9 810 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 AP1B1Q10567 949 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 SMAD4Q13485 552 aaKnown RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 HTR4Q13639 388 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 MPPE1Q53F39 396 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 JAMLQ86YT9 394 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 MFSD6LQ8IWD5 586 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 TAB3Q8N5C8 712 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ALLCQ8N6M5 410 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 FAM71DQ8N9W8 422 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 HJURPQ8NCD3 748 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CCNYQ8ND76 341 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ATL2Q8NHH9 583 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 UBXN4Q92575 508 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 RPGRIP1Q96KN7 1286 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 QKIQ96PU8 341 aaKnown RBP eCLIP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms