RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RBM5P52756 815 aaKnown RBP eCLIP4.79□□□□□ -1.64
LINC00393-202ENST00000452852 PRKAG1P54619 331 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 VAMP2P63027 116 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 MYO1EQ12965 1108 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 PDCLQ13371 301 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 TSTQ16762 297 aaKnown RBP4.79□□□□□ -1.64
LINC00393-202ENST00000452852 TTC22Q5TAA0 569 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 MAP3K21Q5TCX8 1036 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 STRIP1Q5VSL9 837 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 SPATA1Q5VX52 437 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 KIAA0895LQ68EN5 471 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 NFRKBQ6P4R8 1299 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 TMEM108Q6UXF1 575 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 BBS12Q6ZW61 710 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 ANKS1BQ7Z6G8 1248 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 OR8H2Q8N162 312 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.79□□□□□ -1.64
LINC00393-202ENST00000452852 NGEFQ8N5V2 710 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 TOR1AIP2Q8NFQ8 470 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 ACTRT2Q8TDY3 377 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 ADAMTS18Q8TE60 1221 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 RFFLQ8WZ73 363 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 RSC1A1Q92681 617 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 MCRS1Q96EZ8 462 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 PDLIM2Q96JY6 352 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 CXorf36Q9H7Y0 433 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 ORC3Q9UBD5 711 aaPredicted RBP4.79□□□□□ -1.64
LINC00393-202ENST00000452852 C19orf53Q9UNZ5 99 aaPredicted RBP4.79□□□□□ -1.64
LINC00393-202ENST00000452852 CNTN6Q9UQ52 1028 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 DERAQ9Y315 318 aa4.79□□□□□ -1.64
LINC00393-202ENST00000452852 LAMB2P55268 1798 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 TRPM7Q96QT4 1865 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 A0A087X0M5 115 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 A0A1B0GX30 115 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 FSD2A1L4K1 749 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 PGPEP1LA6NFU8 196 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 F5H697 171 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 CCER2I3L3R5 266 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 AGPSO00116 658 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 PROM1O43490 865 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 USO1O60763 962 aaKnown RBP4.78□□□□□ -1.64
LINC00393-202ENST00000452852 PPFIA2O75334 1257 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 RPP40O75818 363 aaKnown RBP4.78□□□□□ -1.64
LINC00393-202ENST00000452852 CER1O95813 267 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 MYL6BP14649 208 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 CPA1P15085 419 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 PPP3CBP16298 524 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 SERPINA4P29622 427 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 LRPAP1P30533 357 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 PXNP49023 591 aaPredicted RBP4.78□□□□□ -1.64
LINC00393-202ENST00000452852 SATB1Q01826 763 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 GALNTL6Q49A17 601 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 ATG16L1Q676U5 607 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 SYNE3Q6ZMZ3 975 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 NEK10Q6ZWH5 1172 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 SPARTQ8N0X7 666 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 TDRD7Q8NHU6 1098 aaKnown RBP4.78□□□□□ -1.64
LINC00393-202ENST00000452852 MYCBPAPQ8TBZ2 947 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 CAGE1Q8TC20 777 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 STAMQ92783 540 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 FBXL20Q96IG2 436 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 HIST1H2AAQ96QV6 131 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 MECRQ9BV79 373 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 ABHD16BQ9H3Z7 469 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 ACAD9Q9H845 621 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 RMI1Q9H9A7 625 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 NOD2Q9HC29 1040 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 G6PC2Q9NQR9 355 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 MIS18AQ9NYP9 233 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 DNAJB11Q9UBS4 358 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 TSPYL4Q9UJ04 414 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 TLK1Q9UKI8 766 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 CNPY2Q9Y2B0 182 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 DNAJC16Q9Y2G8 782 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 INSL6Q9Y581 213 aa4.78□□□□□ -1.64
LINC00393-202ENST00000452852 MAP3K15Q6ZN16 1313 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 CCDC196A0A1B0GTZ2 297 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 ERVV-1B6SEH8 477 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 ADM5C9JUS6 153 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 SPTLC2O15270 562 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 MPPED1O15442 326 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 CD3EAPO15446 510 aaKnown RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 DHHO43323 396 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 TIPRLO75663 272 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 DDNO94850 711 aaPredicted RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 CYP21A2P08686 494 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 CNPP09543 421 aaKnown RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 ADORA2AP29274 412 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 NDUFV1P49821 464 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 PRELPP51888 382 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 LOXL3P58215 753 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 HNRNPA0Q13151 305 aaKnown RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 TUBB3Q13509 450 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 SMAD1Q15797 465 aaKnown RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 HLFQ16534 295 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 P3H1Q32P28 736 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 TRIM60Q495X7 471 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms