RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 EFCAB1Q9HAE3 211 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 PRDM16Q9HAZ2 1276 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 ACSS2Q9NR19 701 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 SNX15Q9NRS6 342 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 BRWD3Q6RI45 1802 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 G3V2L1 256 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 CHRNGP07510 517 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 PDGFRAP16234 1089 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 SURF1Q15526 300 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 ZBED5Q49AG3 693 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 SLC9A4Q6AI14 798 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 RWDD4Q6NW29 188 aaKnown RBP17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 C4orf22Q6V702 233 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 THAP11Q96EK4 314 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 NPAS2Q99743 824 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 ILKAPQ9H0C8 392 aaPredicted RBP17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 TXNDC16Q9P2K2 825 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 FER1L6Q2WGJ9 1857 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 TMEM114B3SHH9 223 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 GCATO75600 419 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 ZNF829Q3KNS6 432 aaPredicted RBP17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 FAM47BQ8NA70 645 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 MARK4Q96L34 752 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 CIB1Q99828 191 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 TCHPQ9BT92 498 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 XYLT2Q9H1B5 865 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 HIPK3Q9H422 1215 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 C20orf96Q9NUD7 363 aaPredicted RBP17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 SNX13Q9Y5W8 968 aa17.51■□□□□ 0.39
SCUBE2-202ENST00000450649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 PIK3R2O00459 728 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ADAM23O75077 832 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 E2F6O75461 281 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ATE1O95260 518 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 APBA3O96018 575 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 SESN2P58004 480 aaPredicted RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 PTK2BQ14289 1009 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 PDK2Q15119 407 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 CCDC92Q53HC0 331 aaPredicted RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 MTX3Q5HYI7 312 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ZBTB33Q86T24 672 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 CDKL3Q8IVW4 592 aaPredicted RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 SLC15A3Q8IY34 581 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 CPSF7Q8N684 471 aaKnown RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 PLEKHA8Q96JA3 519 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 HNRNPABQ99729 332 aaKnown RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 RMI1Q9H9A7 625 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ADA2Q9NZK5 511 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 CDH7Q9ULB5 785 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 TRIM38O00635 465 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 OGTO15294 1046 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 HDAC3O15379 428 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 HTRA2O43464 458 aaPredicted RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 MSCO60682 206 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 TRIM13O60858 407 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 GRAP2O75791 330 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 FUCA1P04066 466 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 C8BP07358 591 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ZNF12P17014 697 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 RXRGP48443 463 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 CD151P48509 253 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 BCAP31P51572 246 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 C21orf59P57076 290 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 TARBP2Q15633 366 aaKnown RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 SEL1L3Q68CR1 1132 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 DDHD1Q8NEL9 900 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ATXN7L3BQ96GX2 97 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 GATA5Q9BWX5 397 aaPredicted RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 MRPL4Q9BYD3 311 aaKnown RBP17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ANKRD60Q9BZ19 345 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 PCDHAC1Q9H158 963 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 PDZD7Q9H5P4 517 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ZNF385DQ9H6B1 395 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
SCUBE2-202ENST00000450649 IGKV6D-21A0A0A0MT36 114 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 HTR3EA5X5Y0 456 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 ZNF701M0R085 212 aaPredicted RBP17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 ZBTB11O95625 1053 aaPredicted RBP17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 LTFP02788 710 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 ERVK-10P10266 1014 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 PROZP22891 400 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 EFNA5P52803 228 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 CDH8P55286 799 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 PRAMEP78395 509 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 TFAMQ00059 246 aaKnown RBP17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 SEMA5AQ13591 1074 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 RFTN1Q14699 578 aaPredicted RBP17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 CA9Q16790 459 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 OGFOD2Q6N063 350 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 DCLK2Q8N568 766 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 ASB9Q96DX5 294 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 CPSF3Q9UKF6 684 aaKnown RBP17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 A0A087WXM4 84 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 C2CD4BA6NLJ0 364 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 SLC22A2O15244 555 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 MGAT1P26572 445 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 ICAM3P32942 547 aa17.49■□□□□ 0.39
SCUBE2-202ENST00000450649 CCR10P46092 362 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms