RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CYTH1Q15438 398 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 ARL13AQ5H913 290 aaPredicted RBP14.52□□□□□ -0.09
ERCC3-203ENST00000445889 SCYL1Q96KG9 808 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 PKP2Q99959 881 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 SIKE1Q9BRV8 207 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 CACNG4Q9UBN1 327 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 PCDHB12Q9Y5F1 795 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 AP4B1Q9Y6B7 739 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 NFKBIEO00221 500 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 DPYSL4O14531 572 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 PIGNO95427 931 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 MT-CO1P00395 513 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 SRGAP2BP0DMP2 458 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 CNTFP26441 200 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 RPL10P27635 214 aaKnown RBP14.52□□□□□ -0.09
ERCC3-203ENST00000445889 SNAPC2Q13487 334 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 STEAP4Q687X5 459 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 PCDH20Q8N6Y1 951 aaKnown RBP14.52□□□□□ -0.09
ERCC3-203ENST00000445889 CCNYL1Q8N7R7 359 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 DGCR14Q96DF8 476 aaKnown RBP14.52□□□□□ -0.09
ERCC3-203ENST00000445889 KCNK16Q96T55 309 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 CCDC28BQ9BUN5 200 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 GCOM2Q9BZD3 368 aaPredicted RBP14.52□□□□□ -0.09
ERCC3-203ENST00000445889 NMRAL1Q9HBL8 299 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 C20orf96Q9NUD7 363 aaPredicted RBP14.52□□□□□ -0.09
ERCC3-203ENST00000445889 MORF4L1Q9UBU8 362 aa14.52□□□□□ -0.09
ERCC3-203ENST00000445889 BEST1O76090 585 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 TGFB3P10600 412 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 KLHDC10Q6PID8 442 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 HFE2Q6ZVN8 426 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 URGCPQ8TCY9 931 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 ACMSDQ8TDX5 336 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 USP33Q8TEY7 942 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 RNF139Q8WU17 664 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 EIF2AQ9BY44 585 aaKnown RBP14.51□□□□□ -0.09
ERCC3-203ENST00000445889 PCDHAC1Q9H158 963 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 ASB7Q9H672 318 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 LIN28AQ9H9Z2 209 aaKnown RBP14.51□□□□□ -0.09
ERCC3-203ENST00000445889 GALNT8Q9NY28 637 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 ATXN10Q9UBB4 475 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 GNEQ9Y223 722 aaKnown RBP14.51□□□□□ -0.09
ERCC3-203ENST00000445889 PTPRFP10586 1907 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 SCN1AP35498 2009 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 PCSK6P29122 969 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 GRIA4P48058 902 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 NR2C2P49116 596 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 ADIGQ0VDE8 80 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 VGLL4Q14135 290 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 FSCBQ5H9T9 825 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 OGFRL1Q5TC84 451 aaPredicted RBP14.51□□□□□ -0.09
ERCC3-203ENST00000445889 ZNF280DQ6N043 979 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 RNF169Q8NCN4 708 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 ZFP28Q8NHY6 868 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 PRICKLE1Q96MT3 831 aaPredicted RBP14.51□□□□□ -0.09
ERCC3-203ENST00000445889 APBA2Q99767 749 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 FAM49AQ9H0Q0 323 aaPredicted RBP14.51□□□□□ -0.09
ERCC3-203ENST00000445889 STN1Q9H668 368 aaKnown RBP14.51□□□□□ -0.09
ERCC3-203ENST00000445889 ANLNQ9NQW6 1124 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 PSMD13Q9UNM6 376 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 CDY2AQ9Y6F7 541 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 CDY1Q9Y6F8 540 aa14.51□□□□□ -0.09
ERCC3-203ENST00000445889 M0QYT0 321 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 ZBTB24O43167 697 aaPredicted RBP14.5□□□□□ -0.09
ERCC3-203ENST00000445889 TRIM13O60858 407 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 ASLP04424 464 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 MCF2P10911 925 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 DESP17661 470 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 TFEBP19484 476 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 MYLK3Q32MK0 819 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 MOB2Q70IA6 237 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 AMIGO2Q86SJ2 522 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 KLHL32Q96NJ5 620 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 RBBP8Q99708 897 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 SMARCAD1Q9H4L7 1026 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 RHBDL2Q9NX52 303 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.5□□□□□ -0.09
ERCC3-203ENST00000445889 VANGL2Q9ULK5 521 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 RLFQ13129 1914 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 SMIM31A0A1B0GVY4 71 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 HBP1O60381 514 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 NMBRP28336 390 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 TKTP29401 623 aaKnown RBP14.5□□□□□ -0.09
ERCC3-203ENST00000445889 SCNN1BP51168 640 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 MYBPC1Q00872 1141 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 GRM3Q14832 879 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 PABPC1LQ4VXU2 614 aaKnown RBP14.5□□□□□ -0.09
ERCC3-203ENST00000445889 LAYNQ6UX15 382 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 KYQ8NBH2 561 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 KCTD4Q8WVF5 259 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 ILKAPQ9H0C8 392 aaPredicted RBP14.5□□□□□ -0.09
ERCC3-203ENST00000445889 ADA2Q9NZK5 511 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 USP3Q9Y6I4 520 aa14.5□□□□□ -0.09
ERCC3-203ENST00000445889 NEMP2A6NFY4 417 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 CASQ2O14958 399 aaPredicted RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 SPTLC1O15269 473 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 TSPAN1O60635 241 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 PTPN1P18031 435 aaKnown RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 RPL5P46777 297 aaKnown RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 NUMBP49757 651 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms