RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CLTAP09496 248 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PFKLP17858 780 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 RBMS1P29558 406 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 KRT2P35908 639 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 HSD17B3P37058 310 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PEX19P40855 299 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PPP1R2P41236 205 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 SKIV2L2P42285 1042 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 ABL2P42684 1182 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 CTSKP43235 329 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 GUCY2FP51841 1108 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PEX3P56589 373 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 E2F1Q01094 437 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 INSM1Q01101 510 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 GUCY2DQ02846 1103 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 MCL1Q07820 350 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 ZNF844Q08AG5 666 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 NR5A1Q13285 461 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 MTA1Q13330 715 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 SNX1Q13596 522 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 CUL3Q13618 768 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 LAMB3Q13751 1172 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 NFE2Q16621 373 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 DDR2Q16832 855 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 ANO4Q32M45 955 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 KLHDC7AQ5VTJ3 777 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 NUGGCQ68CJ6 796 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 LAYNQ6UX15 382 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 ZPBP2Q6X784 338 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 USP53Q70EK8 1073 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TRPM8Q7Z2W7 1104 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 SPATA21Q7Z572 469 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 METTL3Q86U44 580 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 DDX42Q86XP3 938 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 MIB1Q86YT6 1006 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 FAM114A1Q8IWE2 563 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 DIS3L2Q8IYB7 885 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PHTF2Q8N3S3 785 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TEKT4Q8WW24 435 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 IFT81Q8WYA0 676 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 RFFLQ8WZ73 363 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PRCCQ92733 491 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 SIPA1Q96FS4 1042 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 DHTKD1Q96HY7 919 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 ZBTB45Q96K62 511 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 CCDC42Q96M95 316 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 NOX5Q96PH1 765 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TRAPPC9Q96Q05 1148 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 DEPDC7Q96QD5 511 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 ACOX2Q99424 681 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 GABRG3Q99928 467 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 MMTAG2Q9BU76 263 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TLR10Q9BXR5 811 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 NSRP1Q9H0G5 558 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 RAB17Q9H0T7 212 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 PCED1AQ9H1Q7 454 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 BHMT2Q9H2M3 363 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 ITM2CQ9NQX7 267 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 EXOC1Q9NV70 894 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 SMPD4Q9NXE4 827 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TRPM5Q9NZQ8 1165 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 USP36Q9P275 1121 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 CFAP97Q9P2B7 532 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 WDR35Q9P2L0 1181 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TBC1D14Q9P2M4 693 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 LRWD1Q9UFC0 647 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 TMEM59LQ9UK28 342 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 RPL26L1Q9UNX3 145 aaKnown RBP6.7□□□□□ -1.34
HDAC6-210ENST00000441703 STARD13Q9Y3M8 1113 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 CPQQ9Y646 472 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 LRRK2Q5S007 2527 aa6.7□□□□□ -1.34
HDAC6-210ENST00000441703 MYH10P35580 1976 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 A0A087X0B3 334 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 MACROD2A1Z1Q3 448 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 DPPA5A6NC42 116 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 GFRA2O00451 464 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 WNT7AO00755 349 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 CYB561D2O14569 222 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 SYNCRIPO60506 623 aaKnown RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 USP12O75317 370 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 DXOO77932 396 aaKnown RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 MOCS3O95396 460 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 GSTA2P09210 222 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 CKMT2P17540 419 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 GNAZP19086 355 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 POU3F2P20265 443 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 HPDP32754 393 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 MAGEA1P43355 309 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 LSSP48449 732 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 TPMTP51580 245 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 NCALDP61601 193 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 MXRA7P84157 204 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 ATP11AP98196 1134 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 BNIP1Q12981 228 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 STRN3Q13033 797 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 TAF11Q15544 211 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 UAP1Q16222 522 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-210ENST00000441703 KYAT1Q16773 422 aa6.69□□□□□ -1.34
HDAC6-210ENST00000441703 LINC00303Q3SY05 128 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms