RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 XRRA1Q6P2D8 792 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 NCCRP1Q6ZVX7 275 aaPredicted RBP20.7■□□□□ 0.9
SHOX2-203ENST00000441443 DCLK2Q8N568 766 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 RMND5BQ96G75 393 aaPredicted RBP20.7■□□□□ 0.9
SHOX2-203ENST00000441443 CEP41Q9BYV8 373 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 BARX2Q9UMQ3 279 aaPredicted RBP20.7■□□□□ 0.9
SHOX2-203ENST00000441443 STAMBPO95630 424 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 CTBSQ01459 385 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 KCNT2Q6UVM3 1135 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 DLG3Q92796 817 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 CIB1Q99828 191 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 SNRNP25Q9BV90 132 aaKnown RBP20.69■□□□□ 0.9
SHOX2-203ENST00000441443 GATA5Q9BWX5 397 aaPredicted RBP20.69■□□□□ 0.9
SHOX2-203ENST00000441443 C19orf81C9J6K1 198 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 G3V2L1 256 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 GPR25O00155 361 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 OATP04181 439 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 PORP16435 677 aaPredicted RBP20.69■□□□□ 0.9
SHOX2-203ENST00000441443 NUMBP49757 651 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 TXNL4AP83876 142 aaKnown RBP20.69■□□□□ 0.9
SHOX2-203ENST00000441443 INSCQ1MX18 579 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 FAM183BPQ6ZVS7 135 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 NLGN2Q8NFZ4 835 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 YIPF2Q9BWQ6 316 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 PAIP1Q9H074 479 aaKnown RBP20.69■□□□□ 0.9
SHOX2-203ENST00000441443 SNX13Q9Y5W8 968 aa20.69■□□□□ 0.9
SHOX2-203ENST00000441443 CROCCQ5TZA2 2017 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 WDR81Q562E7 1941 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 CAPNS1P04632 268 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 JUNP05412 331 aaKnown RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 COL6A2P12110 1019 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 PTPN11Q06124 597 aaPredicted RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 STEAP4Q687X5 459 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 FASTKD5Q7L8L6 764 aaKnown RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 CARM1Q86X55 608 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 CDKL3Q8IVW4 592 aaPredicted RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 LZTR1Q8N653 840 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 ZNF597Q96LX8 424 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 ELOVL4Q9GZR5 314 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 TUT1Q9H6E5 874 aaKnown RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 CDC14AQ9UNH5 594 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 FZD9O00144 591 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 GCATO75600 419 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 VAPBO95292 243 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 PGK2P07205 417 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 GPD2P43304 727 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 PHKA2P46019 1235 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 RGS7P49802 495 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 AP3M2P53677 418 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 NUP107P57740 925 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 CAPSQ13938 189 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 CCDC14Q49A88 953 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 MTX3Q5HYI7 312 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 APOBEC3FQ8IUX4 373 aaKnown RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 LRRC71Q8N4P6 559 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 PCDH20Q8N6Y1 951 aaKnown RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 ARNTL2Q8WYA1 636 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 ILKAPQ9H0C8 392 aaPredicted RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 AP4S1Q9Y587 144 aa20.68■□□□□ 0.9
SHOX2-203ENST00000441443 COL11A1P12107 1806 aaPredicted RBP20.68■□□□□ 0.9
SHOX2-203ENST00000441443 CYP2F1P24903 491 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 PGGT1BP53609 377 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 PDK2Q15119 407 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 LY6KQ17RY6 165 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 TMEM132AQ24JP5 1023 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 DHRS4L2Q6PKH6 230 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 C12orf43Q96C57 262 aaKnown RBP20.67■□□□□ 0.9
SHOX2-203ENST00000441443 ISOC1Q96CN7 298 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 VPS28Q9UK41 221 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 MFHAS1Q9Y4C4 1052 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 KANSL1LA0AUZ9 987 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 UBA1P22314 1058 aaKnown RBP20.67■□□□□ 0.9
SHOX2-203ENST00000441443 ARL2P36404 184 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 PPARGP37231 505 aaPredicted RBP20.67■□□□□ 0.9
SHOX2-203ENST00000441443 VGLL4Q14135 290 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 CCDC153Q494R4 210 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 ZBTB46Q86UZ6 589 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 CNDP1Q96KN2 507 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 SYBUQ9NX95 663 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 ZNHIT2Q9UHR6 403 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 ZNF112Q9UJU3 913 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 MATN2O00339 956 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 XPOTO43592 962 aaKnown RBP20.67■□□□□ 0.9
SHOX2-203ENST00000441443 TRIM13O60858 407 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 OLIG2Q13516 323 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 PTK2BQ14289 1009 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 EML3Q32P44 896 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 SEL1L3Q68CR1 1132 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 GRAMD4Q6IC98 578 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 FAM47BQ8NA70 645 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 HEXIM2Q96MH2 286 aaKnown RBP20.67■□□□□ 0.9
SHOX2-203ENST00000441443 PPP1R16BQ96T49 567 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 OSBPL11Q9BXB4 747 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 EFCAB1Q9HAE3 211 aa20.67■□□□□ 0.9
SHOX2-203ENST00000441443 TRIM43BA6NCK2 446 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 HOXC6P09630 235 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 PHEXP78562 749 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 SEMA5AQ13591 1074 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 HEATR6Q6AI08 1181 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms