RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 LCA5LO95447 670 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 NDUFV2P19404 249 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 CNR2P34972 360 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 NNMTP40261 264 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 MAPKAPK2P49137 400 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 KRT83P78385 493 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 GNA12Q03113 381 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 SIM2Q14190 667 aaPredicted RBP20.72■□□□□ 0.91
TSSC4-206ENST00000440813 MESDQ14696 234 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 USP39Q53GS9 565 aaKnown RBP20.72■□□□□ 0.91
TSSC4-206ENST00000440813 PRR23BQ6ZRT6 265 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 CEP68Q76N32 757 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 GAB3Q8WWW8 586 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 RLN3Q8WXF3 142 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 RFFLQ8WZ73 363 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 NKD2Q969F2 451 aaPredicted RBP20.72■□□□□ 0.91
TSSC4-206ENST00000440813 BAG1Q99933 345 aaPredicted RBP20.72■□□□□ 0.91
TSSC4-206ENST00000440813 RETREG1Q9H6L5 497 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 CATSPERBQ9H7T0 1116 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 PCDHA13Q9Y5I0 950 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 EPN1Q9Y6I3 576 aaPredicted RBP20.72■□□□□ 0.91
TSSC4-206ENST00000440813 EML5Q05BV3 1969 aa20.72■□□□□ 0.91
TSSC4-206ENST00000440813 EIF3CLB5ME19 914 aaKnown RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 PROB1E7EW31 1015 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 EEF2KO00418 725 aaKnown RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 DCLK1O15075 740 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 NDUFA10O95299 355 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 RARAP10276 462 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 PLA2G5P39877 138 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 CAMK2GQ13555 558 aaPredicted RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 LPAL2Q16609 132 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 BOLA3Q53S33 107 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 TXNRD3NBQ6F5E7 133 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 KIAA1324Q6UXG2 1013 aaKnown RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 RAD9BQ6WBX8 426 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 ZNF783Q6ZMS7 281 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 CACUL1Q86Y37 369 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 PSTKQ8IV42 348 aaKnown RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 RHOT2Q8IXI1 618 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 RTL3Q8N8U3 475 aaKnown RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 DCAF4L2Q8NA75 395 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 KDM1BQ8NB78 822 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 MRGPRX1Q96LB2 322 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 EIF3CQ99613 913 aaKnown RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 C2orf49Q9BVC5 232 aaPredicted RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 MKRN2Q9H000 416 aaKnown RBP20.71■□□□□ 0.91
TSSC4-206ENST00000440813 SEMA4AQ9H3S1 761 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 ATP13A1Q9HD20 1204 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 PRSS16Q9NQE7 514 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 VPS51Q9UID3 782 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 TFR2Q9UP52 801 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 VPS13AQ96RL7 3174 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 CKAP5Q14008 2032 aa20.71■□□□□ 0.91
TSSC4-206ENST00000440813 CBX4O00257 560 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 DAPK3O43293 454 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 GOT1P17174 413 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 GLDCP23378 1020 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 GJC1P36383 396 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 ACVRL1P37023 503 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 COPAP53621 1224 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 SLC25A11Q02978 314 aaKnown RBP20.7■□□□□ 0.9
TSSC4-206ENST00000440813 HADHQ16836 314 aaKnown RBP20.7■□□□□ 0.9
TSSC4-206ENST00000440813 HNRNPA1L2Q32P51 320 aaKnown RBP20.7■□□□□ 0.9
TSSC4-206ENST00000440813 ACCSLQ4AC99 568 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 IL31Q6EBC2 164 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 LINGO4Q6UY18 593 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 TMPRSS6Q8IU80 811 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 OR2T3Q8NH03 318 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 EPC1Q9H2F5 836 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 PRDM16Q9HAZ2 1276 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.7■□□□□ 0.9
TSSC4-206ENST00000440813 LCMT1Q9UIC8 334 aa20.7■□□□□ 0.9
TSSC4-206ENST00000440813 FGF10O15520 208 aaPredicted RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 RAMP2O60895 175 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 SIN3BO75182 1162 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 IPO7O95373 1038 aaKnown RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 MT-CO1P00395 513 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 LMNAP02545 664 aaKnown RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 HTR7P34969 479 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 POLD3Q15054 466 aaPredicted RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 RFX8Q6ZV50 586 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 ZNF354CQ86Y25 554 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 TMEM139Q8IV31 216 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 FRMD1Q8N878 549 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 TEKT4Q8WW24 435 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 ARHGEF2Q92974 986 aaKnown RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 MAGEH1Q9H213 219 aa20.69■□□□□ 0.9
TSSC4-206ENST00000440813 LUC7LQ9NQ29 371 aaKnown RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 CWC15Q9P013 229 aaKnown RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 SMG5Q9UPR3 1016 aaKnown RBP20.69■□□□□ 0.9
TSSC4-206ENST00000440813 EDDM13A0A1B0GTR0 161 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 GOLGA6L3A6NEY3 463 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 WASH4PA8MWX3 477 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 MTA2O94776 668 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 VAV1P15498 845 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 ETFBP38117 255 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 P2RY2P41231 377 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 NOP2P46087 812 aaKnown RBP20.68■□□□□ 0.9
TSSC4-206ENST00000440813 TAS2R40P59535 323 aa20.68■□□□□ 0.9
TSSC4-206ENST00000440813 DLG2Q15700 870 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms