RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ASB5Q8WWX0 329 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 VPS33BQ9H267 617 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 PAPOLBQ9NRJ5 636 aaKnown RBP3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 MSRB1Q9NZV6 116 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 NOB1Q9ULX3 412 aaKnown RBP3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 PCDHA12Q9UN75 941 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 TJP1Q07157 1748 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 VPS13AQ96RL7 3174 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 ITPR1Q14643 2758 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 CEP295Q9C0D2 2601 aa3.38□□□□□ -1.87
HMGB1P18-201ENST00000438801 COL4A4P53420 1690 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 KIF1AQ12756 1690 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 COL2A1P02458 1487 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRXQ9BXM0 1461 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 IGSF10Q6WRI0 2623 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 TRBV5-3A0A0A0MS03 114 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 C4orf47A7E2U8 309 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 TAF4O00268 1085 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLC28A2O43868 658 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 MMP10P09238 476 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ALADP13716 330 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 TFEBP19484 476 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 IDUAP35475 653 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 VPS41P49754 854 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 DGKQP52824 942 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZXDBP98169 803 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 RHDQ02161 417 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 FHL3Q13643 280 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ACOX1Q15067 660 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 AASDHQ4L235 1098 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ARHGAP29Q52LW3 1261 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 RGMBQ6NW40 437 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 C18orf65Q6ZTR6 163 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 UEVLDQ8IX04 471 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ADGRF4Q8IZF3 695 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 SUN3Q8TAQ9 357 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF479Q96JC4 524 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 MSLNLQ96KJ4 702 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 GATA5Q9BWX5 397 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLCO5A1Q9H2Y9 848 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 MOV10Q9HCE1 1003 aaKnown RBP3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ABHD10Q9NUJ1 306 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 TBC1D23Q9NUY8 699 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF212Q9UDV6 495 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 AGO2Q9UKV8 859 aaKnown RBP3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 VPS4AQ9UN37 437 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 MTUS2Q5JR59 1369 aa3.37□□□□□ -1.87
HMGB1P18-201ENST00000438801 MYO9BQ13459 2157 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 ALS2Q96Q42 1657 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 SMG6Q86US8 1419 aaKnown RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 LRRC37A2A6NM11 1700 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 COL1A1P02452 1464 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 DSPP15924 2871 aaKnown RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 ATRQ13535 2644 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 FN1P02751 2386 aaKnown RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 A0A0G2JK05 382 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 EME2A4GXA9 379 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 TTC34A8MYJ7 566 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 MGEA5O60502 916 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 UGDHO60701 494 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZC3H11AO75152 810 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 MT-ND5P03915 603 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 NGFRP08138 427 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 TBXAS1P24557 533 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 PGGT1BP53609 377 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 IGBP1P78318 339 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 PPATQ06203 517 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 INPP5JQ15735 1006 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 SOWAHCQ53LP3 525 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 FAM102BQ5T8I3 360 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 CCDC149Q6ZUS6 474 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 SDR16C5Q8N3Y7 309 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 TMEM199Q8N511 208 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 FAM156AQ8NDB6 213 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 CELF1Q92879 486 aaKnown RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 MSI2Q96DH6 328 aaKnown RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 SNX22Q96L94 193 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 SENP7Q9BQF6 1050 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 TMEM204Q9BSN7 226 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 RNF26Q9BY78 433 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLC25A32Q9H2D1 315 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 ASNSD1Q9NWL6 643 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 RNF123Q5XPI4 1314 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 ALPK3Q96L96 1907 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF609O15014 1411 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 TROQ12816 1431 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 PPIP5K1Q6PFW1 1433 aa3.36□□□□□ -1.87
HMGB1P18-201ENST00000438801 ADGRB1O14514 1584 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 GOLIM4O00461 696 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRYO14603 147 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 PRPF4O43172 522 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 ATG13O75143 517 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 LUC7L3O95232 432 aaKnown RBP3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 SLC3A2P08195 630 aaKnown RBP3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 DUSP1P28562 367 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 HOXD12P35452 270 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 PBX1P40424 430 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 SOX2P48431 317 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 POLD2P49005 469 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 P2RX3P56373 397 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms