RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PNPLA3Q9NST1 481 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF229Q9UJW7 825 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CROTQ9UKG9 612 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RAP2CQ9Y3L5 183 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TAF6LQ9Y6J9 622 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 KDM4FA0A1W2PPD8 638 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 KCNQ2O43526 872 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CREB3O43889 395 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 NCAM1P13591 858 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 YY1P25490 414 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CYLC2Q14093 348 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ADGRF2Q8IZF7 708 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 KDM1BQ8NB78 822 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RHEBL1Q8TAI7 183 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PRCCQ92733 491 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 C8orf48Q96LL4 319 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CHP1Q99653 195 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 C9orf16Q9BUW7 83 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 C10orf88Q9H8K7 445 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 DDX4Q9NQI0 724 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 FRMPD3Q5JV73 1810 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 BHMG1C9JSJ3 638 aaPredicted RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 NPHS1O60500 1241 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SIN3BO75182 1162 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 GPIP06744 558 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 NQO1P15559 274 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 KDELR1P24390 212 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ASMTP46597 345 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 HNRNPFP52597 415 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ARFIP1P53367 373 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 LCP2Q13094 533 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SH3BP5LQ7L8J4 393 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 RHPN2Q8IUC4 686 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 BEND7Q8N7W2 519 aaPredicted RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PMM1Q92871 262 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 TADA1Q96BN2 335 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 C1QTNF7Q9BXJ2 289 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SENP2Q9HC62 589 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ZDHHC18Q9NUE0 388 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PRKAG2Q9UGJ0 569 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 RPS6KL1Q9Y6S9 549 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SPTBN2O15020 2390 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 C2CD4BA6NLJ0 364 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PP2D1A8MPX8 630 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PLK4O00444 970 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 C4BPBP20851 252 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 GCKP35557 465 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 CHKAP35790 457 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 NOMO1Q15155 1222 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 LONRF1Q17RB8 773 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 INTS11Q5TA45 600 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 OXR1Q8N573 874 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PRPF31Q8WWY3 499 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SNX27Q96L92 541 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 GLT1D1Q96MS3 346 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 RILPQ96NA2 401 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 MAGEH1Q9H213 219 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 EHD1Q9H4M9 534 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 INTS10Q9NVR2 710 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PHF11Q9UIL8 331 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PLLPQ9Y342 182 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SNX24Q9Y343 169 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 COL11A1P12107 1806 aaPredicted RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 NPHP3-ACAD11A0A0J9YXS1 232 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 PNMA8CA0A1B0GUJ8 204 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 TCP10L2B9ZVM9 353 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 CFLARO15519 480 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 COBLO75128 1261 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 CNOT3O75175 753 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 AP2A1O95782 977 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ESR1P03372 595 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SLC2A4P14672 509 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ITGA2P17301 1181 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ATP5F1P24539 256 aaPredicted RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ADARP55265 1226 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 ACTR3P61158 418 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 GUCY1A3Q02108 690 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 MVKQ03426 396 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 RWDD4Q6NW29 188 aaKnown RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 RNF165Q6ZSG1 346 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SEPT8Q92599 483 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 SDCBP2Q9H190 292 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 DENND2DQ9H6A0 471 aaPredicted RBP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 AHSPQ9NZD4 102 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 BCCIPQ9P287 314 aaKnown RBP eCLIP3.84□□□□□ -1.8
SHPRH-205ENST00000433355 MAGEL2Q9UJ55 1249 aa3.84□□□□□ -1.8
SHPRH-205ENST00000433355 XYLBO75191 536 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 POLR2EP19388 210 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ITGA1P56199 1179 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PSMC6P62333 389 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CNGA3Q16281 694 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 STEAP4Q687X5 459 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PIGWQ7Z7B1 504 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 KRT73Q86Y46 540 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 FCGR1BQ92637 280 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PKD2L2Q9NZM6 624 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PCDHB1Q9Y5F3 818 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 RLFQ13129 1914 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 A0A087WXM4 84 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms