RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 P4HA2O15460 535 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 BNIP3LO60238 219 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 RFPL3O75679 317 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 ZIC2O95409 532 aaPredicted RBP17.05■□□□□ 0.32
VARS-216ENST00000428445 ADH1BP00325 375 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 EPHA8P29322 1005 aaPredicted RBP17.05■□□□□ 0.32
VARS-216ENST00000428445 ACADSBP45954 432 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
VARS-216ENST00000428445 HES3Q5TGS1 186 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
VARS-216ENST00000428445 KANSL1Q7Z3B3 1105 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 C14orf80Q86SX3 495 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 TMEM110Q86TL2 294 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 TRIM59Q8IWR1 403 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 ATP6V0D2Q8N8Y2 350 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 SKA1Q96BD8 255 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 ALG14Q96F25 216 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 MYOCQ99972 504 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 SRRTQ9BXP5 876 aaKnown RBP17.05■□□□□ 0.32
VARS-216ENST00000428445 RAI2Q9Y5P3 530 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 AK5Q9Y6K8 562 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 RNF103O00237 685 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
VARS-216ENST00000428445 GNA15P30679 374 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 USP8P40818 1118 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 EIF2S3P41091 472 aaKnown RBP17.04■□□□□ 0.32
VARS-216ENST00000428445 CNTN1Q12860 1018 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 ARHGAP44Q17R89 818 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 FBXL22Q6P050 247 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 PRPF39Q86UA1 669 aaKnown RBP17.04■□□□□ 0.32
VARS-216ENST00000428445 CREBRFQ8IUR6 639 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 PASD1Q8IV76 773 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 TSC1Q92574 1164 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 RNF34Q969K3 372 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 THAP9Q9H5L6 903 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 FAM204AQ9H8W3 233 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.04■□□□□ 0.32
VARS-216ENST00000428445 VANGL2Q9ULK5 521 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 PCDHGA1Q9Y5H4 931 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 SNX10Q9Y5X0 201 aa17.04■□□□□ 0.32
VARS-216ENST00000428445 BECN2A8MW95 431 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 SART1O43290 800 aaKnown RBP17.03■□□□□ 0.32
VARS-216ENST00000428445 LATO43561 262 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 SLC9A1P19634 815 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 NNMTP40261 264 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 PDCLQ13371 301 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 AUHQ13825 339 aaKnown RBP17.03■□□□□ 0.32
VARS-216ENST00000428445 ELAVL3Q14576 367 aaKnown RBP17.03■□□□□ 0.32
VARS-216ENST00000428445 DLG2Q15700 870 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 NAPEPLDQ6IQ20 393 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 FBXL19Q6PCT2 694 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 Q6ZVU0 165 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 BEND5Q7L4P6 421 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 MFSD2AQ8NA29 543 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 RPRD1AQ96P16 312 aaPredicted RBP17.03■□□□□ 0.32
VARS-216ENST00000428445 MED15Q96RN5 788 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 CPXM1Q96SM3 734 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 DDIT4Q9NX09 232 aa17.03■□□□□ 0.32
VARS-216ENST00000428445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.03■□□□□ 0.32
VARS-216ENST00000428445 TRIM38O00635 465 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 MED7O43513 233 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 PLRG1O43660 514 aaKnown RBP17.02■□□□□ 0.32
VARS-216ENST00000428445 MT-CO1P00395 513 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 MYF5P13349 255 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 RXRGP48443 463 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 ARRB1P49407 418 aaPredicted RBP17.02■□□□□ 0.32
VARS-216ENST00000428445 PLK1P53350 603 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 TAS2R38P59533 333 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 NME3Q13232 169 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 MORC3Q14149 939 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 C6orf118Q5T5N4 469 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 AGBL4Q5VU57 503 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 SFMBT2Q5VUG0 894 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 OR8D1Q8WZ84 308 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 SPAG5Q96R06 1193 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 FEM1AQ9BSK4 669 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 FZD3Q9NPG1 666 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 SLC12A6Q9UHW9 1150 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 AJAP1Q9UKB5 411 aaPredicted RBP17.02■□□□□ 0.32
VARS-216ENST00000428445 PPM1HQ9ULR3 514 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 OR51B4Q9Y5P0 310 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 HS3ST4Q9Y661 456 aa17.02■□□□□ 0.32
VARS-216ENST00000428445 A0A1B0GVM2 712 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 K7ERQ8 282 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 SLC31A1O15431 190 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 CNTN5O94779 1100 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 GNA14O95837 355 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 CTSLP07711 333 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 PRLRP16471 622 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 ZNF18P17022 549 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 TFE3P19532 575 aaPredicted RBP17.01■□□□□ 0.31
VARS-216ENST00000428445 ABCG1P45844 678 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 CDK17Q00537 523 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 SLC12A1Q13621 1099 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 STAT4Q14765 748 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 SLC45A4Q5BKX6 768 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 SMYD5Q6GMV2 418 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 OR6B2Q6IFH4 312 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms