RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MTM1Q13496 603 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 PAFAH1B3Q15102 231 aaKnown RBP13.77□□□□□ -0.21
PRPF39-202ENST00000424478 FAXCQ5TGI0 409 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 LRRC19Q9H756 370 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 KIF9Q9HAQ2 790 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 TRPV4Q9HBA0 871 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 INTS6Q9UL03 887 aaKnown RBP13.77□□□□□ -0.21
PRPF39-202ENST00000424478 BPTFQ12830 3046 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 SGK1O00141 431 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 MCF2LO15068 1137 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 FGF10O15520 208 aaPredicted RBP13.77□□□□□ -0.21
PRPF39-202ENST00000424478 KCNN4O15554 427 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 RAD51CO43502 376 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 MT-CO1P00395 513 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 ADH5P11766 374 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 CDH4P55283 916 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 LEXMQ3ZCV2 418 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 MPPE1Q53F39 396 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 ELSPBP1Q96BH3 223 aa13.77□□□□□ -0.21
PRPF39-202ENST00000424478 DNAJC17Q9NVM6 304 aaKnown RBP13.77□□□□□ -0.21
PRPF39-202ENST00000424478 K7ERQ8 282 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 PHF2O75151 1096 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 CYBBP04839 570 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 COILP38432 576 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-202ENST00000424478 STK19P49842 368 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-202ENST00000424478 GNA12Q03113 381 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 FCHO2Q0JRZ9 810 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 GEN1Q17RS7 908 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 GAB4Q2WGN9 574 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 GSTA5Q7RTV2 222 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 CPXM2Q8N436 756 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 SLC35B2Q8TB61 432 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 CCDC110Q8TBZ0 833 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 EXOC2Q96KP1 924 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 NECAB3Q96P71 396 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-202ENST00000424478 OLFM3Q96PB7 478 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 HEBP1Q9NRV9 189 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 TBC1D14Q9P2M4 693 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 EPS15L1Q9UBC2 864 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 VPS28Q9UK41 221 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 TYW5A2RUC4 315 aaKnown RBP13.76□□□□□ -0.21
PRPF39-202ENST00000424478 CLDN11O75508 207 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 TGM2P21980 687 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 CKAP4Q07065 602 aaKnown RBP13.76□□□□□ -0.21
PRPF39-202ENST00000424478 TMEM215Q68D42 235 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 ZNF366Q8N895 744 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 DDX50Q9BQ39 737 aaKnown RBP13.76□□□□□ -0.21
PRPF39-202ENST00000424478 ATP13A1Q9HD20 1204 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 ZNF510Q9Y2H8 683 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 VPS13AQ96RL7 3174 aa13.76□□□□□ -0.21
PRPF39-202ENST00000424478 GOLGA6L10A0A0M3HER8 536 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 GARSP41250 739 aaKnown RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 MAXP61244 160 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 ZBTB17Q13105 803 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 RUNX3Q13761 415 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 OASLQ15646 514 aaKnown RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 C5orf22Q49AR2 442 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 SLC44A3Q8N4M1 653 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 ATPAF2Q8N5M1 289 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 CYB5D2Q8WUJ1 264 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 AGAP3Q96P47 875 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 NAP1L3Q99457 506 aaPredicted RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 THG1LQ9NWX6 298 aaKnown RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 TULP3O75386 442 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 SLU7O95391 586 aaKnown RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 TXNDC11Q6PKC3 985 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 ARHGEF2Q92974 986 aaKnown RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 FEM1AQ9BSK4 669 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 MTG2Q9H4K7 406 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 DMGDHQ9UI17 866 aaKnown RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 IPO11Q9UI26 975 aaKnown RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 ANHXE9PGG2 379 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 BNIP3LO60238 219 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 MAFKO60675 156 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 LATS1O95835 1130 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 PENKP01210 267 aaPredicted RBP13.75□□□□□ -0.21
PRPF39-202ENST00000424478 GJA4P35212 333 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 CCNG2Q16589 344 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 ERCC6LQ2NKX8 1250 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 FUT11Q495W5 492 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 UMODL1-AS1Q8N2C9 162 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 NXPE3Q969Y0 559 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 DPH5Q9H2P9 285 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 ZMYM5Q9UJ78 669 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 EFR3BQ9Y2G0 817 aa13.75□□□□□ -0.21
PRPF39-202ENST00000424478 SOBPA7XYQ1 873 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 ARNTLO00327 626 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 SLC10A7Q0GE19 358 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 GALNT2Q10471 571 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 OLIG2Q13516 323 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 CEP112Q8N8E3 955 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 TFB1MQ8WVM0 346 aaKnown RBP13.74□□□□□ -0.21
PRPF39-202ENST00000424478 ATP2A3Q93084 1043 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 USP29Q9HBJ7 922 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 UBP1Q9NZI7 540 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 CHD5Q8TDI0 1954 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 SLC9A3R1O14745 358 aaPredicted RBP13.74□□□□□ -0.21
PRPF39-202ENST00000424478 ECI2O75521 394 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 JCHAINP01591 159 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 ZFXP17010 805 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms