RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 SEPHS1P49903 392 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 ZIK1Q3SY52 487 aaPredicted RBP11.31□□□□□ -0.6
TNC-203ENST00000423613 FRMD7Q6ZUT3 714 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 CHST13Q8NET6 341 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 BLOC1S5Q8TDH9 187 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 POF1BQ8WVV4 589 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 FAM151AQ8WW52 585 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 AP1S3Q96PC3 154 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 EMILIN2Q9BXX0 1053 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 TTYH1Q9H313 450 aaPredicted RBP11.31□□□□□ -0.6
TNC-203ENST00000423613 EVA1BQ9NVM1 165 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 SERPINA3P01011 423 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 FAM83EQ2M2I3 478 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 SLCO6A1Q86UG4 719 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 ZNF615Q8N8J6 731 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 PIK3CDO00329 1044 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 AMHP03971 560 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 ATF6P18850 670 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 MSR1P21757 451 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 SP100P23497 879 aaPredicted RBP11.31□□□□□ -0.6
TNC-203ENST00000423613 MAPK7Q13164 816 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 ACAP2Q15057 778 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 FGD3Q5JSP0 725 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 AFTPHQ6ULP2 937 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 HERC6Q8IVU3 1022 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 PADI4Q9UM07 663 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 EDARQ9UNE0 448 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 SOAT2O75908 522 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 NADKO95544 446 aaPredicted RBP11.31□□□□□ -0.6
TNC-203ENST00000423613 MT-CO1P00395 513 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 RB1P06400 928 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 MADCAM1Q13477 382 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 MTSS1LQ765P7 747 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 SLC9A6Q92581 669 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 FAR2Q96K12 515 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 ACAT2Q9BWD1 397 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 ARMC7Q9H6L4 198 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 DYRK1BQ9Y463 629 aa11.31□□□□□ -0.6
TNC-203ENST00000423613 A0A087X0T9 212 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 EME2A4GXA9 379 aaPredicted RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 FAM172BPA6NC97 362 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 NTSR2O95665 410 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 SUPT20HL2P0C7V6 817 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 FAM228BP0C875 321 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 PTPAQ15257 358 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 ESRP1Q6NXG1 681 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 MEIOBQ8N635 442 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 TRPM5Q9NZQ8 1165 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 DGKBQ9Y6T7 804 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 HMGB3O15347 200 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 MTSS1O43312 755 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 B3GAT3O94766 335 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 APOC1P02654 83 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 NELFEP18615 380 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 SLC1A6P48664 564 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 SMCO1Q147U7 214 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 RNF220Q5VTB9 566 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 HLA-DQA1Q5Y7H0 255 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 CEP68Q76N32 757 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 AMER2Q8N7J2 671 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 FBXO36Q8NEA4 188 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 NSMCE2Q96MF7 247 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 VPS28Q9UK41 221 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 AK5Q9Y6K8 562 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 BCLAF3A2AJT9 711 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 C2orf81A6NN90 581 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 PMPCBO75439 489 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 CYP11B2P19099 503 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 GMFBP60983 142 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 CLEC16AQ2KHT3 1053 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 UGT3A1Q6NUS8 523 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 FAM9CQ8IZT9 166 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 FAM136AQ96C01 138 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 ATG4CQ96DT6 458 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 UNKQ9C0B0 810 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 PABPC3Q9H361 631 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 WDCPQ9H6R7 721 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 POLR1AO95602 1720 aaPredicted RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 CHURC1-FNTBB4DL54 471 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 MAP3K6O95382 1288 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 NUDT14O95848 222 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 FDFT1P37268 417 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 RFX5P48382 616 aaPredicted RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 HNMTP50135 292 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 NR1H2P55055 460 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 PKNOX1P55347 436 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 PRKAA1Q13131 559 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 TOP3AQ13472 1001 aaPredicted RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 IRF2BPLQ9H1B7 796 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 DPP3Q9NY33 737 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms