RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-202ENST00000421712 ATP13A1Q9HD20 1204 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.16■□□□□ 0.18
BRAT1-202ENST00000421712 DONSONQ9NYP3 566 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 HPCAL4Q9UM19 191 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 PCDHGA2Q9Y5H1 932 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 A0A1W2PQF6 199 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 H3BRJ5 948 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 CBX4O00257 560 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 FGF10O15520 208 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-202ENST00000421712 RAMP2O60895 175 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 TNNT1P13805 278 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 GOT1P17174 413 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 ETFBP38117 255 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 STK19P49842 368 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-202ENST00000421712 MRE11P49959 708 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 POLD3Q15054 466 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-202ENST00000421712 ZNF783Q6ZMS7 281 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 CYP4V2Q6ZWL3 525 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-202ENST00000421712 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 CPNE8Q86YQ8 564 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 TMEM139Q8IV31 216 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 KCTD6Q8NC69 237 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 MDGA1Q8NFP4 955 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 TEKT4Q8WW24 435 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 ALG14Q96F25 216 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 TPSD1Q9BZJ3 242 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 TMEM245Q9H330 911 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 NDFIP2Q9NV92 336 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 SLCO3A1Q9UIG8 710 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 ARIH1Q9Y4X5 557 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-202ENST00000421712 OR51B4Q9Y5P0 310 aa16.15■□□□□ 0.18
BRAT1-202ENST00000421712 NRDCO43847 1150 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 SNAP91O60641 907 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 MTA2O94776 668 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 KRT7P08729 469 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 MAN1A1P33908 653 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 ACVRL1P37023 503 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 ZNF135P52742 658 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-202ENST00000421712 CDH6P55285 790 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 NHLH1Q02575 133 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 SLC25A11Q02978 314 aaKnown RBP16.14■□□□□ 0.17
BRAT1-202ENST00000421712 SEMA3BQ13214 749 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 ENPP2Q13822 863 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 USP39Q53GS9 565 aaKnown RBP16.14■□□□□ 0.17
BRAT1-202ENST00000421712 ODF2Q5BJF6 829 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 TXNRD3NBQ6F5E7 133 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 KIAA1324Q6UXG2 1013 aaKnown RBP16.14■□□□□ 0.17
BRAT1-202ENST00000421712 RFX8Q6ZV50 586 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 CEP68Q76N32 757 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 TXLNBQ8N3L3 684 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 DCAF4L2Q8NA75 395 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 ATP11CQ8NB49 1132 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 MRGPRX3Q96LB0 322 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 PSMB7Q99436 277 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 MAGEH1Q9H213 219 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 MTG2Q9H4K7 406 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 CWC15Q9P013 229 aaKnown RBP16.14■□□□□ 0.17
BRAT1-202ENST00000421712 ZNF212Q9UDV6 495 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 EBF1Q9UH73 591 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 VPS51Q9UID3 782 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 INVSQ9Y283 1065 aa16.14■□□□□ 0.17
BRAT1-202ENST00000421712 CCDC163A0A0D9SF12 145 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 TTC34A8MYJ7 566 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 SPOPO43791 374 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 BNIP3LO60238 219 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 ERCC2P18074 760 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 GABRG2P18507 467 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 TAS2R40P59535 323 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 SRSF5Q13243 272 aaKnown RBP16.13■□□□□ 0.17
BRAT1-202ENST00000421712 TCEAL1Q15170 157 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 DPYSL2Q16555 572 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 ATP13A4Q4VNC1 1196 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 RETSATQ6NUM9 610 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 LINGO4Q6UY18 593 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 PRR23BQ6ZRT6 265 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 TMPRSS6Q8IU80 811 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 KDM1BQ8NB78 822 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 ZBTB44Q8NCP5 570 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 CCDC112Q8NEF3 446 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 ARHGEF2Q92974 986 aaKnown RBP16.13■□□□□ 0.17
BRAT1-202ENST00000421712 DESI2Q9BSY9 194 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 CALN1Q9BXU9 219 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 SLC6A17Q9H1V8 727 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 PRDM16Q9HAZ2 1276 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 KLHL11Q9NVR0 708 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 NEU3Q9UQ49 428 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 REXO2Q9Y3B8 237 aaKnown RBP16.13■□□□□ 0.17
BRAT1-202ENST00000421712 HYOU1Q9Y4L1 999 aa16.13■□□□□ 0.17
BRAT1-202ENST00000421712 A0A0A6YYK5 440 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-202ENST00000421712 EDDM13A0A1B0GTR0 161 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 RCCD1A6NED2 376 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 WASH4PA8MWX3 477 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 BUB1O43683 1085 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 RPP40O75818 363 aaKnown RBP16.12■□□□□ 0.17
BRAT1-202ENST00000421712 ACADMP11310 421 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 NDUFV2P19404 249 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 COMTP21964 271 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 AMPD1P23109 780 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 GLDCP23378 1020 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms