RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NELL2Q99435 816 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 SLC12A9Q9BXP2 914 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 FBXO44Q9H4M3 255 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 EBF3Q9H4W6 596 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 C8orf33Q9H7E9 229 aaPredicted RBP7.28□□□□□ -1.24
HMGN1-205ENST00000419378 PNPLA8Q9NP80 782 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 HPS4Q9NQG7 708 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 GKN1Q9NS71 199 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 SMPD4Q9NXE4 827 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 IL37Q9NZH6 218 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 TCFL5Q9UL49 500 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 NDRG2Q9UN36 371 aaKnown RBP7.28□□□□□ -1.24
HMGN1-205ENST00000419378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGN1-205ENST00000419378 WNT6Q9Y6F9 365 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 WDR87Q6ZQQ6 2873 aa7.28□□□□□ -1.24
HMGN1-205ENST00000419378 CFAP54Q96N23 3096 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CACNA1IQ9P0X4 2223 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 SSU72P8A0A1W2PR75 194 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 OTOL1A6NHN0 477 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 LEFTY2O00292 366 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 NCAM2O15394 837 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 COCHO43405 550 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 ZNF205O95201 554 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 ESR1P03372 595 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 MBL2P11226 248 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CD19P15391 556 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 ACO1P21399 889 aaKnown RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 NOP2P46087 812 aaKnown RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 RPS9P46781 194 aaKnown RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 IFNAR2P48551 515 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 PGFP49763 221 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 YWHAEP62258 255 aaKnown RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CYP4F3Q08477 520 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 FZD5Q13467 585 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 RUNX3Q13761 415 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 PDGFRLQ15198 375 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 TCEA2Q15560 299 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 MSMPQ1L6U9 139 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 PRSS53Q2L4Q9 553 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 GOLGA7BQ2TAP0 167 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 HECTD3Q5T447 861 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 SNX30Q5VWJ9 437 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 ARHGAP17Q68EM7 881 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 TMPRSS7Q7RTY8 843 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 RALGPS2Q86X27 583 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 IRF2BP1Q8IU81 584 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 C1orf210Q8IVY1 113 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 ARHGEF19Q8IW93 802 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 PPM1KQ8N3J5 372 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CPA6Q8N4T0 437 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 TMEM145Q8NBT3 493 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 GPT2Q8TD30 523 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 OSCP1Q8WVF1 389 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 ATOH1Q92858 354 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 KAT5Q92993 513 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CHFRQ96EP1 664 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CCDC140Q96MF4 163 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 DUSP16Q9BY84 665 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 RNF38Q9H0F5 515 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 INTS2Q9H0H0 1204 aaKnown RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 IRF2BPLQ9H1B7 796 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 SPATA6Q9NWH7 488 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 DUS2Q9NX74 493 aaKnown RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CHORDC1Q9UHD1 332 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 SCML2Q9UQR0 700 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CPQQ9Y646 472 aa7.27□□□□□ -1.25
HMGN1-205ENST00000419378 ZFHX2Q9C0A1 2572 aaPredicted RBP7.27□□□□□ -1.25
HMGN1-205ENST00000419378 CCDC163A0A0D9SF12 145 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 GOLGA6L22H0YM25 854 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 O00370 1275 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 AURKAO14965 403 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 TLR5O60602 858 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 GSTM1P09488 218 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 CHRNB1P11230 501 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 CD96P40200 585 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 NBL1P41271 181 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 KIF11P52732 1056 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 BCAT1P54687 386 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 SUMO1P63165 101 aaKnown RBP7.26□□□□□ -1.25
HMGN1-205ENST00000419378 GCNT1Q02742 428 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 BNIP3Q12983 259 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 MTAPQ13126 283 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 LRRC32Q14392 662 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 PON2Q15165 354 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 C21orf62-AS1Q17RA5 79 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 TMEM270Q6UE05 265 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 Q6ZS52 159 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 RRAGAQ7L523 313 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 CCDC186Q7Z3E2 898 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 PIGZQ86VD9 579 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 TTC30AQ86WT1 665 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 DDX42Q86XP3 938 aaKnown RBP eCLIP7.26□□□□□ -1.254e-6■□□□□ 10.9
HMGN1-205ENST00000419378 CREBRFQ8IUR6 639 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 MAML2Q8IZL2 1156 aaPredicted RBP7.26□□□□□ -1.25
HMGN1-205ENST00000419378 KIAA1958Q8N8K9 716 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 ANKRD52Q8NB46 1076 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 ASB11Q8WXH4 323 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 KCTD13Q8WZ19 329 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 ATP2A3Q93084 1043 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 UBXN6Q9BZV1 441 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms